RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SNX9Q9Y5X1 595 aa4.66□□□□□ -1.66
USP48-211ENST00000526044 SCN1AP35498 2009 aa4.66□□□□□ -1.66
USP48-211ENST00000526044 WIPF3A6NGB9 483 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 A8MVJ9 347 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 POC1B-GALNT4F8VUJ3 575 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 TMEM189-UBE2V1I3L0A0 370 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 I3L4J1 428 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 M0QZQ0 153 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 PPEF2O14830 753 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 COQ9O75208 318 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 NOL4O94818 638 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 RB1P06400 928 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 WEE2P0C1S8 567 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 CCDC172P0C7W6 258 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 NHLRC4P0CG21 123 aaPredicted RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 VDRP11473 427 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 MYOGP15173 224 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 UCHL3P15374 230 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 TNFSF4P23510 183 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 CALRP27797 417 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 RBL1P28749 1068 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 USP8P40818 1118 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 STAT1P42224 750 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 BRCC3P46736 316 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 DIO1P49895 249 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 RENBPP51606 427 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 CDH8P55286 799 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 POLR2FP61218 127 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 YWHAEP62258 255 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 NOP14P78316 857 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 GCNT1Q02742 428 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SRSF4Q08170 494 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 LMAN2Q12907 356 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ELAVL2Q12926 359 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 CUL2Q13617 745 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 TRIM14Q14142 442 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 DRAP1Q14919 205 aaPredicted RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 CLCA4Q14CN2 919 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 RAB30Q15771 203 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ST3GAL2Q16842 350 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SOWAHAQ2M3V2 549 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 FAM209BQ5JX69 171 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 FAM171A1Q5VUB5 890 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ARMC3Q5W041 872 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 GJB7Q6PEY0 223 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 LVRNQ6Q4G3 990 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SERPINA13PQ6UXR4 307 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 BCDIN3DQ7Z5W3 292 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 CHSY1Q86X52 802 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 CEP57Q86XR8 500 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 VSTM4Q8IW00 320 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 THEM5Q8N1Q8 247 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 TMEM86AQ8N2M4 240 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 GALNT4Q8N4A0 578 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 TTC39CQ8N584 583 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 PNLDC1Q8NA58 520 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 COLGALT1Q8NBJ5 622 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SPC24Q8NBT2 197 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 MBD3L2Q8NHZ7 208 aaPredicted RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 ADAMTS18Q8TE60 1221 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 IGSF21Q96ID5 467 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SENP8Q96LD8 212 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ASB2Q96Q27 587 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 FYTTD1Q96QD9 318 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 SPAG5Q96R06 1193 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 STK33Q9BYT3 514 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 SNX25Q9H3E2 840 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 FAM124BQ9H5Z6 455 aaPredicted RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 APOBEC3GQ9HC16 384 aaKnown RBP4.65□□□□□ -1.67
USP48-211ENST00000526044 SIX2Q9NPC8 291 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 NLRC4Q9NPP4 1024 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 STK39Q9UEW8 545 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 POLG2Q9UHN1 485 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 FBXL5Q9UKA1 691 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ADAM28Q9UKQ2 775 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 GTF2A1LQ9UNN4 478 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 ITIH6Q6UXX5 1313 aa4.65□□□□□ -1.67
USP48-211ENST00000526044 NLRC5Q86WI3 1866 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 GBF1Q92538 1859 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 LINC01553A4QN01 128 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 A8MXQ7 604 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 AKR1B15C9JRZ8 316 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 F8W810 466 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SYN3O14994 580 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 EPHB6O15197 1021 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CCNT2O60583 730 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 TACC1O75410 805 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 FGF18O76093 207 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 OAZ2O95190 189 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CXCL14O95715 111 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 MT-CO3P00414 261 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CA3P07451 260 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CHRM5P08912 532 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 ODC1P11926 461 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 KRT5P13647 590 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 FERP16591 822 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CD58P19256 250 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 TYMPP19971 482 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 WARSP23381 471 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms