RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 SCRN2Q96FV2 425 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 SLC45A3Q96JT2 553 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 ALS2CR12Q96Q35 445 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 MCCC1Q96RQ3 725 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 SLC38A3Q99624 504 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 MGME1Q9BQP7 344 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 TRIM7Q9C029 511 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 GPN2Q9H9Y4 310 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 PPP2R2CQ9Y2T4 447 aa9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRAPPC4-206ENST00000525303 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAFKO60675 156 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 PGLSO95336 258 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 EML2O95834 649 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 PDHA1P08559 390 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 AMPD1P23109 780 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 MSNP26038 577 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 MMP13P45452 471 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 HCAR3P49019 387 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 CDC20Q12834 499 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 PYCR3Q53H96 274 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ARMC12Q5T9G4 340 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 LRRC38Q5VT99 294 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 LRRC66Q68CR7 880 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ADAMTSL4Q6UY14 1074 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 TIPARPQ7Z3E1 657 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 GALNT13Q8IUC8 556 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAP7D3Q8IWC1 876 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 RHOT1Q8IXI2 618 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 UNC5BQ8IZJ1 945 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 BBS5Q8N3I7 341 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 SFRP1Q8N474 314 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 OR10G6Q8NH81 332 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 SCAMP4Q969E2 229 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 KIAA1143Q96AT1 154 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 TRIM44Q96DX7 344 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 TEFMQ96QE5 360 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 SMIM14Q96QK8 99 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 SPRY4Q9C004 299 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ABCG8Q9H221 673 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ZWILCHQ9H900 591 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 APMAPQ9HDC9 416 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ETNK2Q9NVF9 386 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 DDX56Q9NY93 547 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ANAPC2Q9UJX6 822 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 GUCA1BQ9UMX6 200 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 PRRC2CQ9Y520 2896 aaKnown RBP9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 ESPL1Q14674 2120 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
TRAPPC4-206ENST00000525303 SPTBP11277 2137 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 SHANK1Q9Y566 2161 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 MACROD2A1Z1Q3 448 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 RCCD1A6NED2 376 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 H3BRJ5 948 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 INPP4BO15327 924 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PSTPIP1O43586 416 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ASMTLO95671 621 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 MAP4P27816 1152 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 OAS2P29728 719 aaKnown RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ARL4AP40617 200 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 CDH6P55285 790 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 MC2RQ01718 297 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 HHEXQ03014 270 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PTSQ03393 145 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 NFATC2Q13469 925 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 LRP8Q14114 963 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PDK2Q15119 407 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 DPYSL2Q16555 572 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 SMTNL2Q2TAL5 461 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 DEFB109BQ30KR1 87 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 RALGPS1Q5JS13 557 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 MARC1Q5VT66 337 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 WDR74Q6RFH5 385 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 CEACAM20Q6UY09 585 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 KDELC2Q7Z4H8 507 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ARHGAP22Q7Z5H3 698 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ATPAF2Q8N5M1 289 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 TRIM58Q8NG06 486 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PIH1D2Q8WWB5 315 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 STARD8Q92502 1023 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 NCSTNQ92542 709 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 AGAP2Q99490 1192 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 NT5MQ9NPB1 228 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 RCOR3Q9P2K3 495 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 KLHL3Q9UH77 587 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PPIL1Q9Y3C6 166 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PRKAB1Q9Y478 270 aa9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 PCYT1BQ9Y5K3 369 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC4-206ENST00000525303 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms