RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CDK18Q07002 472 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ACSM1Q08AH1 577 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 DUSP8Q13202 625 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 USP10Q14694 798 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 LARS2Q15031 903 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 ACOX1Q15067 660 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 PTCHD3Q3KNS1 767 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 IFI44LQ53G44 452 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 RARS2Q5T160 578 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 PHF19Q5T6S3 580 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 RNASEH2BQ5TBB1 312 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 LIN9Q5TKA1 542 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ANKRD34AQ69YU3 496 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 OR7E24Q6IFN5 339 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 Q6ZS46 218 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 ZC3H18Q86VM9 953 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 NKAIN4Q8IVV8 208 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SLC43A2Q8N370 569 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KCNH5Q8NCM2 988 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 NLGN4YQ8NFZ3 816 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 OR52J3Q8NH60 311 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 DNAJB14Q8TBM8 379 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 GPT2Q8TD30 523 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SLC20A1Q8WUM9 679 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 DNAJA4Q8WW22 397 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 CKAP2Q8WWK9 683 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SELENOMQ8WWX9 145 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ASB11Q8WXH4 323 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 STARD8Q92502 1023 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 NKD2Q969F2 451 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 AZIN2Q96A70 460 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 EFHD2Q96C19 240 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 ARHGEF26Q96DR7 871 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 HEXIM2Q96MH2 286 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 WDR92Q96MX6 357 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 QRFPRQ96P65 431 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 LRRC3BQ96PB8 259 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KLHL5Q96PQ7 755 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 PCDHB18PQ96TA0 734 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 NEU1Q99519 415 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ASCL2Q99929 193 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 PIGQQ9BRB3 760 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 UQCC2Q9BRT2 126 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ABHD6Q9BV23 337 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KATNB1Q9BVA0 655 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ZNF416Q9BWM5 594 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 NPLQ9BXD5 320 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 CRNKL1Q9BZJ0 848 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 TMEM168Q9H0V1 697 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FZD8Q9H461 694 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 RNPEPL1Q9HAU8 725 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 ASAH2Q9NR71 780 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 AGPAT3Q9NRZ7 376 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 C1GALT1Q9NS00 363 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FARSBQ9NSD9 589 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 PANK4Q9NVE7 773 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 TRNAU1APQ9NX07 287 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 OR6C2Q9NZP2 312 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 A4GNTQ9UNA3 340 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 SHOC2Q9UQ13 582 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 KCNK6Q9Y257 313 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 RAXQ9Y2V3 346 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 UBE2J1Q9Y385 318 aaPredicted RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 SPATA31D1Q6ZQQ2 1576 aa4.47□□□□□ -1.69
CD44-213ENST00000525209 PPRC1Q5VV67 1664 aaKnown RBP4.47□□□□□ -1.69
CD44-213ENST00000525209 UACAQ9BZF9 1416 aa4.46□□□□□ -1.69
CD44-213ENST00000525209 ABCC2Q92887 1545 aa4.46□□□□□ -1.69
CD44-213ENST00000525209 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PN81 502 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 MAGEB17A8MXT2 336 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RSPH10B2B2RC85 870 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ADM5C9JUS6 153 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 E9PLN8 166 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 GOLGA8SH3BPF8 625 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 AGPSO00116 658 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LGALS8O00214 317 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 TEX28O15482 410 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 LRRTM2O43300 516 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 TBX19O60806 448 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 GCATO75600 419 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SLC25A12O75746 678 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 AGTP01019 485 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 IL1BP01584 269 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PGK2P07205 417 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CHRM2P08172 466 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ENO2P09104 434 aaPredicted RBP4.46□□□□□ -1.7
CD44-213ENST00000525209 UQCRFS1P1P0C7P4 283 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RSPH10BP0C881 870 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 RAP2AP10114 183 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 PEPDP12955 493 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 ATF2P15336 505 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 GNAZP19086 355 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 SDHBP21912 280 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 KCNA3P22001 575 aa4.46□□□□□ -1.7
CD44-213ENST00000525209 CYP2F1P24903 491 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms