RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TMEM41AQ96HV5 264 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CCDC138Q96M89 665 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 TEFMQ96QE5 360 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 GFM1Q96RP9 751 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 DDX23Q9BUQ8 820 aaKnown RBP1.73□□□□□ -2.13
CD44-212ENST00000524922 MXD3Q9BW11 206 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 TRIM31Q9BZY9 425 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 GFRA4Q9GZZ7 299 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 SPATC1LQ9H0A9 340 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PORCNQ9H237 461 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 MMP28Q9H239 520 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 CXorf56Q9H5V9 222 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 EBF2Q9HAK2 575 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 OBP2BQ9NPH6 170 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 GRHL1Q9NZI5 618 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 NLKQ9UBE8 527 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ANGPTL2Q9UKU9 493 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 DNHD1Q96M86 4753 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 PLXNA3P51805 1871 aa1.73□□□□□ -2.13
CD44-212ENST00000524922 ABCA12Q86UK0 2595 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 TEX15Q9BXT5 2789 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 RAD50Q92878 1312 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ACACAQ13085 2346 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 A0A1B0GVM2 712 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 GOLGA6L3A6NEY3 463 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ASB14A6NK59 587 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ZNF587BE7ETH6 402 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 WDR46O15213 610 aaKnown RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 CTAGE5O15320 804 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ITM2AO43736 263 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SERPINI2O75830 405 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 BAG3O95817 575 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ASGR1P07306 291 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MMP3P08254 477 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 IGHV4-30-4P0DP06 118 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 KCNA5P22460 613 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 C21orf33P30042 268 aaPredicted RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 PPP2R1AP30153 589 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SSTR2P30874 369 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 HOXA6P31267 233 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 HOXC8P31273 242 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 TTKP33981 857 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 TIMP3P35625 211 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 PPM1AP35813 382 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 GNALP38405 381 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CXCR3P49682 368 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SLC18A2Q05940 514 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 FAM27E3Q08E93 113 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SLC39A14Q15043 492 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 RBBP5Q15291 538 aaKnown RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 CCL14Q16627 93 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CEP85LQ5SZL2 805 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 STPG1Q5TH74 334 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 DGAT2L7PQ6IED9 249 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 C1orf228Q6PIY5 440 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 DSTYKQ6XUX3 929 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 GATAD2AQ86YP4 633 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 BRSK2Q8IWQ3 736 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 KLHDC8BQ8IXV7 354 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 RPAP2Q8IXW5 612 aaPredicted RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 GPR65Q8IYL9 337 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ZNF441Q8N8Z8 693 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 KBTBD3Q8NAB2 608 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 POC1AQ8NBT0 407 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ZBTB44Q8NCP5 570 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SETD9Q8NE22 299 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MCPH1Q8NEM0 835 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ATP8B4Q8TF62 1192 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MYD88Q99836 296 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MOV10L1Q9BXT6 1211 aaKnown RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 TEX13BQ9BXU2 312 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CADM1Q9BY67 442 aaKnown RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 LHPPQ9H008 270 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 ALDH8A1Q9H2A2 487 aaPredicted RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 UBTD1Q9HAC8 227 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 WDR6Q9NNW5 1121 aaKnown RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 CHST12Q9NRB3 414 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MUTYHQ9UIF7 546 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CD207Q9UJ71 328 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CDC23Q9UJX2 597 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 C19orf53Q9UNZ5 99 aaPredicted RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 GAB2Q9UQC2 676 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CLDN16Q9Y5I7 305 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MMP24Q9Y5R2 645 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 DMXL2Q8TDJ6 3036 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 C2CD3Q4AC94 2353 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 CACNA1FO60840 1977 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 SCN10AQ9Y5Y9 1956 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 MTORP42345 2549 aa1.72□□□□□ -2.13
CD44-212ENST00000524922 GREB1LQ9C091 1923 aaPredicted RBP1.72□□□□□ -2.13
CD44-212ENST00000524922 UBR5O95071 2799 aaPredicted RBP1.71□□□□□ -2.14
CD44-212ENST00000524922 APC2O95996 2303 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 DOPEY1Q5JWR5 2465 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 SAA2-SAA4A0A096LPE2 208 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 PI4KAP2A4QPH2 592 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 TMEM247A6NEH6 219 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 EPOPA6NHQ4 379 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 FAM157AC9JC47 383 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 H0Y626 953 aa1.71□□□□□ -2.14
CD44-212ENST00000524922 EYA2O00167 538 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms