RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 UTP6Q9NYH9 597 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 TMCO1Q9UM00 188 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 TRAV19A0A0A6YYK7 116 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 E5RI56 91 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 BTN3A1O00481 513 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 AZIN1O14977 448 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CFLARO15519 480 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 TGM5O43548 720 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 OR1I1O60431 355 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 LILRB3O75022 631 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 NIPSNAP2O75323 286 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CDK14O94921 469 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 PGLSO95336 258 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CSF2RAP15509 400 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CTPS1P17812 591 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 EEF1DP29692 281 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 ATP4BP51164 291 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CDH13P55290 713 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 NAA20P61599 178 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 SH3BP2P78314 561 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 SLC7A9P82251 487 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 STX5Q13190 355 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 PTPRRQ15256 657 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 GRAMD1BQ3KR37 738 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 AGKQ53H12 422 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 KANK2Q63ZY3 851 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 LYSMD3Q7Z3D4 306 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 APCDD1Q8J025 514 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 CPXM2Q8N436 756 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 PAF1Q8N7H5 531 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 NPAS2Q99743 824 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 IL17CQ9P0M4 197 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 SLC30A1Q9Y6M5 507 aa13.67□□□□□ -0.22
LDLRAD3-202ENST00000524419 LRRC14BA6NHZ5 514 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 GOLGA8CPA6NN73 597 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 K7ERQ8 282 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 CDC7O00311 574 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 AP1G1O43747 822 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 BCAS2O75934 225 aaPredicted RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 MT-CO1P00395 513 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 TIMP1P01033 207 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 ESR1P03372 595 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 FGF4P08620 206 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 CNPP09543 421 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 ARSAP15289 507 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 MAPK8P45983 427 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 IL2P60568 153 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 STX1BP61266 288 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 LCP2Q13094 533 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 CEACAM7Q14002 265 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 RARS2Q5T160 578 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 NAIF1Q69YI7 327 aaPredicted RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 HTR3DQ70Z44 454 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 GAREM2Q75VX8 874 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 TRPC4APQ8TEL6 797 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 ACDQ96AP0 544 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 LRGUKQ96M69 825 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 CENPKQ9BS16 269 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 IKZF3Q9UKT9 509 aa13.66□□□□□ -0.22
LDLRAD3-202ENST00000524419 STX16-NPEPL1H3BU86 382 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 STX16O14662 325 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 DENRO43583 198 aaKnown RBP13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 FGF18O76093 207 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 CTSAP10619 480 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 HMGCLP35914 325 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 PSMD8P48556 350 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 CLCN2P51788 898 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 ADARP55265 1226 aaKnown RBP13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 BCL2L1Q07817 233 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 ADGRE1Q14246 886 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 PTK2BQ14289 1009 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 PDK3Q15120 406 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 UGT3A2Q3SY77 523 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 MPP7Q5T2T1 576 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 ANKS6Q68DC2 871 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 UGT3A1Q6NUS8 523 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 TXNDC11Q6PKC3 985 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 CCDC149Q6ZUS6 474 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 LARP4Q71RC2 724 aaKnown RBP eCLIP13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 METTL3Q86U44 580 aaKnown RBP13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 TMC8Q8IU68 726 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 CAMK1DQ8IU85 385 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 BBS7Q8IWZ6 715 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 GALNT15Q8N3T1 639 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 CD200R1Q8TD46 325 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
LDLRAD3-202ENST00000524419 TWIST2Q8WVJ9 160 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms