RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CAPS	Q13938	189 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	IL11RA	Q14626	422 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	IQCB1	Q15051	598 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	MEP1B	Q16820	701 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ASTE1	Q2TB18	679 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	P3H1	Q32P28	736 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM196	Q5HYL7	178 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	RGMB	Q6NW40	437 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	IRGC	Q6NXR0	463 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	WDR93	Q6P2C0	686 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SARM1	Q6SZW1	724 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SERPINA13P	Q6UXR4	307 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	DSG4	Q86SJ6	1040 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ARHGAP12	Q8IWW6	846 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	PEX5L	Q8IYB4	626 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SFRP1	Q8N474	314 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	XXYLT1	Q8NBI6	393 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SLC17A8	Q8NDX2	589 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ANKRD20A12P	Q8NF67	263 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	CADM4	Q8NFZ8	388 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	CEP76	Q8TAP6	659 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	FBXO30	Q8TB52	745 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM255B	Q8WV15	326 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	POMGNT1	Q8WZA1	660 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	CORO2A	Q92828	525 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SYAP1	Q96A49	352 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ARRDC3	Q96B67	414 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SAT2	Q96F10	170 aa	Predicted RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ZDHHC12	Q96GR4	267 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	REXO5	Q96IC2	774 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	KLHL15	Q96M94	604 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	NLRP4	Q96MN2	994 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	OSBPL9	Q96SU4	736 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	TUBB2B	Q9BVA1	445 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	IMPG2	Q9BZV3	1241 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	MRPL44	Q9H9J2	332 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ETAA1	Q9NY74	926 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	NINJ2	Q9NZG7	142 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	ACTR3B	Q9P1U1	418 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	FETUB	Q9UGM5	382 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	TUBE1	Q9UJT0	475 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	CPSF3	Q9UKF6	684 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	RAB21	Q9UL25	225 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	MRPS17	Q9Y2R5	130 aa	Known RBP	4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	SCN4A	P35499	1836 aa		4.37	□□□□□ -1.71
PCM1-223	ENST00000524356	THSD7B	Q9C0I4	1608 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF831	Q5JPB2	1677 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ARHGEF37	A1IGU5	675 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	C16orf96	A6NNT2	1141 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CDRT15L2	A8MXV6	281 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356		F5H697	171 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	IFNL4	K9M1U5	179 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356		M0QZQ0	153 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SNAP23	O00161	211 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PER2	O15055	1255 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ADAMDEC1	O15204	470 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	WDR46	O15213	610 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CTIF	O43310	598 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PAGE4	O60829	102 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	BCAS2	O75934	225 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	DDAH2	O95865	285 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HEXB	P07686	556 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	INHBA	P08476	426 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SFTPC	P11686	197 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	AGA	P20933	346 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RBL1	P28749	1068 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MC5R	P33032	325 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HSPA4	P34932	840 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PRKCI	P41743	596 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	NT5C2	P49902	561 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	STAT2	P52630	851 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	EFNA5	P52803	228 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MFAP4	P55083	255 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SLC26A5	P58743	744 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	KRTAP10-12	P60413	245 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	TUBB4B	P68371	445 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PRAME	P78395	509 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HTD2	P86397	168 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MRPL28	Q13084	256 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ALCAM	Q13740	583 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	BAAT	Q14032	418 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RCN2	Q14257	317 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	AAK1	Q2M2I8	961 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HYAL4	Q2M3T9	481 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HFE	Q30201	348 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MAJIN	Q3KP22	176 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CRY2	Q49AN0	593 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF585B	Q52M93	769 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF569	Q5MCW4	686 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ANKRD40	Q6AI12	368 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	FBXL22	Q6P050	247 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	NAPRT	Q6XQN6	538 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MEX3B	Q6ZN04	569 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RABEPK	Q7Z6M1	372 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PIP4P1	Q86T03	277 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	TMPRSS12	Q86WS5	348 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RNF168	Q8IYW5	571 aa	Predicted RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms