RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 KRT14P02533 472 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 CDK16Q00536 496 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 CTBSQ01459 385 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 FOXC1Q12948 553 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 LAMB3Q13751 1172 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 LRP8Q14114 963 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 SEPT6Q14141 434 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 PTPRCAPQ14761 206 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 POU6F1Q14863 301 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 NR0B2Q15466 257 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 LDLRAP1Q5SW96 308 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
CCNC-216ENST00000523961 SLC35F3Q8IY50 421 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 PNPLA1Q8N8W4 532 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 FAM46DQ8NEK8 389 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 OR13C4Q8NGS5 318 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 CCL4L1Q8NHW4 92 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 ZNF398Q8TD17 642 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 STYXQ8WUJ0 223 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 OR2AG1Q9H205 316 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 CASS4Q9NQ75 786 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 SMOXQ9NWM0 555 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 PIH1D1Q9NWS0 290 aaKnown RBP12.4□□□□□ -0.42
CCNC-216ENST00000523961 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 FKBPLQ9UIM3 349 aa12.4□□□□□ -0.42
CCNC-216ENST00000523961 LY6G6EA0A0G2JKS1 128 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 AP3B1O00203 1094 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A9O60656 530 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 CDK14O94921 469 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 PRAMEF1O95521 474 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A6P19224 532 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A1P22309 533 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A4P22310 534 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A3P35503 534 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A5P35504 534 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 GRIA1P42261 906 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 PAFAH1B1P43034 410 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 VPS41P49754 854 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ETF1P62495 437 aaKnown RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 E2F1Q01094 437 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 GPS1Q13098 491 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 TRIP13Q15645 432 aaPredicted RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 ZNF648Q5T619 568 aaPredicted RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 OGFOD3Q6PK18 319 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ADGRG6Q86SQ4 1221 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 C17orf53Q8N3J3 647 aaPredicted RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 CHCHD4Q8N4Q1 142 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 NAT6Q93015 286 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 DNAJC1Q96KC8 554 aaKnown RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 CAPZA3Q96KX2 299 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 TTC25Q96NG3 672 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ZCCHC2Q9C0B9 1178 aaKnown RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 DPEP2Q9H4A9 486 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ASB8Q9H765 288 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A7Q9HAW7 530 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A10Q9HAW8 530 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 UGT1A8Q9HAW9 530 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 NLE1Q9NVX2 485 aaPredicted RBP12.39□□□□□ -0.43
CCNC-216ENST00000523961 SIRPGQ9P1W8 387 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 GULP1Q9UBP9 304 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 TMPRSS11EQ9UL52 423 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 PADI4Q9UM07 663 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 U3KQA8 63 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 NCOR2Q9Y618 2525 aa12.39□□□□□ -0.43
CCNC-216ENST00000523961 CPED1A4D0V7 1026 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
CCNC-216ENST00000523961 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 H7C0S8 307 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 CHUKO15111 745 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 GRID2O43424 1007 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
CCNC-216ENST00000523961 MTX2O75431 263 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 ECEL1O95672 775 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 GP1BAP07359 652 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 MYF5P13349 255 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 TPSB2P20231 275 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 ITGALP20701 1170 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 ADRA1DP25100 572 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 AK4P27144 223 aaPredicted RBP12.38□□□□□ -0.43
CCNC-216ENST00000523961 ACTR1BP42025 376 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 ACTR1AP61163 376 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 SARNPP82979 210 aaKnown RBP12.38□□□□□ -0.43
CCNC-216ENST00000523961 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 SHC2P98077 582 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 XIAPP98170 497 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 TMEM115Q12893 351 aaPredicted RBP12.38□□□□□ -0.43
CCNC-216ENST00000523961 NFATC2Q13469 925 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 GTF2H3Q13889 308 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 TPSAB1Q15661 275 aa12.38□□□□□ -0.43
CCNC-216ENST00000523961 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms