RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 PCDHGA6Q9Y5G7 932 aa7.85□□□□□ -1.15
NSMCE2-213ENST00000523824 PCYT1BQ9Y5K3 369 aaPredicted RBP7.85□□□□□ -1.15
NSMCE2-213ENST00000523824 MN1Q10571 1320 aaPredicted RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 LILRA5A6NI73 299 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 C21orf140B9A014 251 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 TOX3O15405 576 aaPredicted RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 UBXN7O94888 489 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 C9P02748 559 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PDHA1P08559 390 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 RNF224P0DH78 156 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ZNF30P17039 623 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 MMP13P45452 471 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 CCL11P51671 97 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ZNF135P52742 658 aaPredicted RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 STC1P52823 247 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 BECN1Q14457 450 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 NADK2Q4G0N4 442 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 FKBP15Q5T1M5 1219 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 MARC1Q5VT66 337 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ACAD10Q6JQN1 1059 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 CYB5D1Q6P9G0 228 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 MAMDC2Q7Z304 686 aaPredicted RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PPP1R3BQ86XI6 285 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PHYKPLQ8IUZ5 450 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 TRIM48Q8IWZ4 208 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 MCOLN2Q8IZK6 566 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ATPAF2Q8N5M1 289 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PRR7Q8TB68 274 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 CT55Q8WUE5 264 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 THAP4Q8WY91 577 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 SEC14L1Q92503 715 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PLEKHG4BQ96PX9 1271 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 SMIM14Q96QK8 99 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PEBP4Q96S96 227 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 AGPAT1Q99943 283 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 MGME1Q9BQP7 344 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 TRIM55Q9BYV6 548 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 SLC29A3Q9BZD2 475 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ACTL8Q9H568 366 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ZWILCHQ9H900 591 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 RMI1Q9H9A7 625 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 NT5MQ9NPB1 228 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 LHX9Q9NQ69 397 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 RTN4Q9NQC3 1192 aaKnown RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ACSS2Q9NR19 701 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 PARVAQ9NVD7 372 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 CWC15Q9P013 229 aaKnown RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 RCOR3Q9P2K3 495 aaPredicted RBP7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 CELSR2Q9HCU4 2923 aa7.84□□□□□ -1.15
NSMCE2-213ENST00000523824 ANKRD17O75179 2603 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 A0A0J9YYE9 177 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 TMCO5BA8MYB1 307 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 TCP11X1B4DZS4 312 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 H3BRJ5 948 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 EPHB6O15197 1021 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 GRID2O43424 1007 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 FZD6O60353 706 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 MAFKO60675 156 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 LRCH4O75427 683 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 PEX11BO96011 259 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 VIPP01282 170 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 TRBC1P01850 177 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 FGF5P12034 268 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 XRCC1P18887 633 aaPredicted RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 AMPD1P23109 780 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 MIPP30301 263 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 DCTP40126 519 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ARL4AP40617 200 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 LEPRP48357 1165 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 CDH6P55285 790 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 RPS15P62841 145 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 UBE2IP63279 158 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 MRPL49Q13405 166 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 MAMLD1Q13495 774 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 DPYSQ14117 519 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 INPP5JQ15735 1006 aaPredicted RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 DPCR1Q3MIW9 517 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 CACHD1Q5VU97 1274 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 TMCO3Q6UWJ1 677 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 TMEM26Q6ZUK4 368 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 PSTKQ8IV42 348 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ARFGAP1Q8N6T3 406 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 NEK11Q8NG66 645 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ZDHHC12Q96GR4 267 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 GPR87Q9BY21 358 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 CARD9Q9H257 536 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 OSGEPL1Q9H4B0 414 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF768Q9H5H4 540 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 UCK1Q9HA47 277 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 PDE7BQ9NP56 450 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 SLAMF7Q9NQ25 335 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 KLC4Q9NSK0 619 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 OGFRQ9NZT2 677 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 DNPEPQ9ULA0 475 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 CNOT6Q9ULM6 557 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 ZNF451Q9Y4E5 1061 aa7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 PCDHGA9Q9Y5G4 932 aaKnown RBP7.83□□□□□ -1.16
NSMCE2-213ENST00000523824 SLC30A1Q9Y6M5 507 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms