RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FHP07954 510 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PLEKP08567 350 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 STSP08842 583 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PAEPP09466 180 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 OR4E1P0C645 316 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PRR23D2P0DMB1 279 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 COX5BP10606 129 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ATP1A3P13637 1013 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CBR1P16152 277 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PLCG1P19174 1290 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TCN1P20061 433 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 FECHP22830 423 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CD52P31358 61 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 BMPR1AP36894 532 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PHKA2P46019 1235 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ALDH7A1P49419 539 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 DNM2P50570 870 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CASP9P55211 416 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 BCAR1P56945 870 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 IFITM2Q01629 132 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SPIRE1Q08AE8 756 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 C17orf67Q0P5P2 114 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 USP10Q14694 798 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PPP1R3AQ16821 1122 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TCTN1Q2MV58 587 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 EIF2S3LQ2VIR3 472 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF829Q3KNS6 432 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 FIGNQ5HY92 759 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PXDC1Q5TGL8 231 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 E4F1Q66K89 784 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 HEATR6Q6AI08 1181 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SLC9A4Q6AI14 798 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SYCE2Q6PIF2 218 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SUSD1Q6UWL2 747 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GPRIN3Q6ZVF9 776 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SLC24A5Q71RS6 500 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PIWIL3Q7Z3Z3 882 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 DCXRQ7Z4W1 244 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ANKS1BQ7Z6G8 1248 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 RALGPS2Q86X27 583 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 RASGRP3Q8IV61 690 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 METTL13Q8N6R0 699 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GLB1L3Q8NCI6 653 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TBCKQ8TEA7 893 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PAQR8Q8TEZ7 354 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 KLHL6Q8WZ60 621 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SLC5A5Q92911 643 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CPNE4Q96A23 557 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 LENG9Q96B70 501 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 NMD3Q96D46 503 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 OTUB2Q96DC9 234 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 HSPBAP1Q96EW2 488 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF486Q96H40 463 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ZFRQ96KR1 1074 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SERPINB12Q96P63 405 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 QRFPRQ96P65 431 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 CSPG4P5Q96PW8 444 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SNX18Q96RF0 628 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM79Q9BSE2 394 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 EDEM2Q9BV94 578 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TARS2Q9BW92 718 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TRIM54Q9BYV2 358 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ALX4Q9H161 411 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 UBE2ZQ9H832 354 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ZMAT3Q9HA38 289 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 NMUR1Q9HB89 426 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TCF7L1Q9HCS4 588 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 MID1IP1Q9NPA3 183 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SNTG1Q9NSN8 517 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 BMP2KQ9NSY1 1161 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 TRNAU1APQ9NX07 287 aaKnown RBP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 NDE1Q9NXR1 346 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ADAM22Q9P0K1 906 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 ANKMY1Q9P2S6 941 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 SLC13A4Q9UKG4 626 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PLLPQ9Y342 182 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 GPSM3Q9Y4H4 160 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 PCDHB7Q9Y5E2 793 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 REV3LO60673 3130 aa7.5□□□□□ -1.21
HDAC3-216ENST00000523088 A0A0B4J293 547 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SIGLEC16A6NMB1 481 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 IQCF5A8MTL0 148 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 FAM25AB3EWG3 89 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 FAM25CB3EWG5 89 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 FAM25GB3EWG6 89 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 E9PI62 339 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 H7BY64 318 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 LINC01387J3KSC0 135 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 RFXAPO00287 272 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TRIM38O00635 465 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TM9SF1O15321 606 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MSH4O15457 936 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 EFSO43281 561 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms