RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SH3RF2Q8TEC5 729 aa16.12■□□□□ 0.17
USP42-207ENST00000521713 PROX1Q92786 737 aa16.12■□□□□ 0.17
USP42-207ENST00000521713 ABCB10Q9NRK6 738 aa16.12■□□□□ 0.17
USP42-207ENST00000521713 RAP2CQ9Y3L5 183 aa16.12■□□□□ 0.17
USP42-207ENST00000521713 H3BM21 787 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 HDAC3O15379 428 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 IFNA16P05015 189 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 CHRNB2P17787 502 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 DSC2Q02487 901 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 RNF220Q5VTB9 566 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 CLNKQ7Z7G1 428 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 KCTD13Q8WZ19 329 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 MTFMTQ96DP5 389 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 TTYH3Q9C0H2 523 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 ABCG4Q9H172 646 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 REEP1Q9H902 201 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 IMP3Q9NV31 184 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 MRPS33Q9Y291 106 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 TRIM43BA6NCK2 446 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 CYP4F8P98187 520 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 IRF5Q13568 498 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 PWP1Q13610 501 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 GPR107Q5VW38 600 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 CAPN13Q6MZZ7 669 aaPredicted RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 UBE2R2Q712K3 238 aaPredicted RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 HMCESQ96FZ2 354 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 TPD52L2O43399 206 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 SCAMP5Q8TAC9 235 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 ZNF516Q92618 1163 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 COL2A1P02458 1487 aaPredicted RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 A0A1W2PRU2 124 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 TSPAN19P0C672 248 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 GRIA3P42263 894 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 C17orf64Q86WR6 236 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 PSMA8Q8TAA3 256 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 SLC4A5Q9BY07 1137 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 BCAS3Q9H6U6 928 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 ING3Q9NXR8 418 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 MRPL39Q9NYK5 338 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 INVSQ9Y283 1065 aa16.11■□□□□ 0.17
USP42-207ENST00000521713 WBP11Q9Y2W2 641 aaKnown RBP16.11■□□□□ 0.17
USP42-207ENST00000521713 BANF1O75531 89 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 FSHRP23945 695 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 IFNGR2P38484 337 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 GABRB2P47870 512 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 GALK1P51570 392 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 ARPC4P59998 168 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 ILF3Q12906 894 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP42-207ENST00000521713 DEPDC4Q8N2C3 294 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 CDYL2Q8N8U2 506 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 SDCBP2Q9H190 292 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 PIF1Q9H611 641 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 SIX2Q9NPC8 291 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 UBXN8O00124 270 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 GPR17Q13304 367 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 ADGRF1Q5T601 910 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
USP42-207ENST00000521713 CLYBLQ8N0X4 340 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 C8orf48Q96LL4 319 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 TNKS2Q9H2K2 1166 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 EPB41L4BQ9H329 900 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 CLDND1Q9NY35 253 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 NDRG2Q9UN36 371 aaKnown RBP16.1■□□□□ 0.17
USP42-207ENST00000521713 ZNF232Q9UNY5 417 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 KCNH1O95259 989 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 NUDT14O95848 222 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 EPHX4Q8IUS5 362 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 TRIB2Q92519 343 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 LEF1Q9UJU2 399 aaPredicted RBP16.1■□□□□ 0.17
USP42-207ENST00000521713 ADAMTS3O15072 1205 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 PEX11AO75192 247 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 VIPP01282 170 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 GALNT13Q8IUC8 556 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 TMEM139Q8IV31 216 aa16.1■□□□□ 0.17
USP42-207ENST00000521713 FFAR3O14843 346 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 GPR42O15529 346 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 SLC11A1P49279 550 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 TAPT1Q6NXT6 567 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 CYP4X1Q8N118 509 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 LRRC17Q8N6Y2 441 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 OR10G6Q8NH81 332 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
USP42-207ENST00000521713 TRIM39Q9HCM9 518 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 CCDC189A1A4V9 331 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 AZIN1O14977 448 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 PDGFRLQ15198 375 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 GPR135Q8IZ08 494 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 ZNF567Q8N184 647 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 PYROXD2Q8N2H3 581 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 LRRC57Q8N9N7 239 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 AP3S1Q92572 193 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
USP42-207ENST00000521713 PCDHGC4Q9Y5F7 938 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms