RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF302Q9NR11 478 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 NRBP2Q9NSY0 501 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ARL15Q9NXU5 204 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ERAP1Q9NZ08 941 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF215Q9UL58 517 aaPredicted RBP3.39□□□□□ -1.87
VPS13B-209ENST00000521559 FZD10Q9ULW2 581 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF236Q9UL36 1845 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 GRIN2DO15399 1336 aa3.39□□□□□ -1.87
VPS13B-209ENST00000521559 MYH4Q9Y623 1939 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 A0A0U1RQG5 324 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A18PA6NE21 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A16PA6NEW6 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 RRN3P2A6NIE6 340 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 AQP12BA6NM10 295 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A9PA6NNJ1 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PP2D1A8MPX8 630 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 LGALS16A8MUM7 142 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A5PA8MXJ8 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 GTPBP1O00178 669 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 SPRY3O43610 288 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 KIF1CO43896 1103 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PIP5K1CO60331 668 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MED24O75448 989 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A15PP0C7V4 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM90A14PP0C7W9 464 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MYZAPP0CAP1 466 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF286BP0CG31 522 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 SMIM10L2AP0DMW4 78 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 SMIM10L2BP0DMW5 78 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CMA1P23946 247 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 KLRC2P26717 231 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MARK3P27448 753 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 GSTM2P28161 218 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CCT6AP40227 531 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 UBA7P41226 1012 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FAM3BP58499 235 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ZP1P60852 638 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 RHAGQ02094 409 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PRKCEQ02156 737 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ALKBH1Q13686 389 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CTTNQ14247 550 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PLCB4Q15147 1175 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 UGCGQ16739 394 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 BTBD16Q32M84 506 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 TUBB8Q3ZCM7 444 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ARL13AQ5H913 290 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF484Q5JVG2 852 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 SPECC1Q5M775 1068 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 HYIQ5T013 277 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 DCAF12L2Q5VW00 463 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 KRT79Q5XKE5 535 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 HAUS3Q68CZ6 603 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ADALQ6DHV7 355 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CAPRIN2Q6IMN6 1127 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CLEC17AQ6ZS10 378 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 RTL10Q7L3V2 364 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 OTUD6AQ7L8S5 288 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ANKRD33Q7Z3H0 272 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CATSPER3Q86XQ3 398 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 GPSM1Q86YR5 675 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CCDC60Q8IWA6 550 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CADM3Q8N126 398 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MYRIPQ8NFW9 859 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 SPATA3Q8NHX4 192 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ATP8B4Q8TF62 1192 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CLEC4CQ8WTT0 213 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 STYXQ8WUJ0 223 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 NUDCD2Q8WVJ2 157 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PHF21BQ96EK2 531 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CALML4Q96GE6 196 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MMTAG2Q9BU76 263 aaKnown RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CCSER1Q9C0I3 900 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 B3GNT4Q9C0J1 378 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ZNF304Q9HCX3 659 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 CD93Q9NPY3 652 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 ANKEF1Q9NU02 776 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 NDUFAF4Q9P032 175 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 WRAP73Q9P2S5 460 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 HDAC6Q9UBN7 1215 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 FBXO4Q9UKT5 387 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 C19orf53Q9UNZ5 99 aaPredicted RBP3.38□□□□□ -1.87
VPS13B-209ENST00000521559 PKP3Q9Y446 797 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 MYH8P13535 1937 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 NRCAMQ92823 1304 aa3.38□□□□□ -1.87
VPS13B-209ENST00000521559 A0A087WWV3 80 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 TRBV5-7A0A0A0MS05 114 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 FAM237AA0A1B0GTK4 181 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 C17orf102A2RUQ5 167 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MBLAC1A4D2B0 266 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MS4A18H0YCH9 400 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 MAGEB2O15479 319 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 ACTL6BO94805 426 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CD4P01730 458 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PRSS2P07478 247 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 FGF3P11487 239 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PEPDP12955 493 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 PKMP14618 531 aaKnown RBP3.37□□□□□ -1.87
VPS13B-209ENST00000521559 CYP11B2P19099 503 aa3.37□□□□□ -1.87
VPS13B-209ENST00000521559 HOXC8P31273 242 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms