RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 KRT12Q99456 494 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 TDRD1Q9BXT4 1180 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 CDH19Q9H159 772 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ABCG8Q9H221 673 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 HOMER3Q9NSC5 361 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 RBM22Q9NW64 420 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 TAAR2Q9P1P5 351 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 FEZ2Q9UHY8 353 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ATXN7L1Q9ULK2 861 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 RPL26L1Q9UNX3 145 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ATMQ13315 3056 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 K7ENP7 123 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 NVLO15381 856 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 C1QL1O75973 258 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CPNE6O95741 557 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 SOD1P00441 154 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 FGGP02679 453 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 PRB1P04280 392 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 SLC5A2P31639 672 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 GPR3P46089 330 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 POLD2P49005 469 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 TAS2R40P59535 323 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CTBSQ01459 385 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 DSC2Q02487 901 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CLN3Q13286 438 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CASP8Q14790 479 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 PTPRRQ15256 657 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 LRRC38Q5VT99 294 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 PCSK4Q6UW60 755 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CCDC81Q6ZN84 652 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 PIM3Q86V86 326 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 SLITRK4Q8IW52 837 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 PQLC3Q8N755 202 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 EXD1Q8NHP7 514 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 ARRDC2Q8TBH0 407 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 AENQ8WTP8 325 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CAVIN3Q969G5 261 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CMKLR1Q99788 373 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 DMGDHQ9UI17 866 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 CD84Q9UIB8 345 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 LOXL2Q9Y4K0 774 aa12.38□□□□□ -0.43
TRAPPC9-206ENST00000519482 RHPN2P1A8MT19 583 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 ZNF487B1APH4 448 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 B4GAT1O43505 415 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 ECEL1O95672 775 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 PRLP01236 227 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 HGFP14210 728 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 KDELR1P24390 212 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 AK4P27144 223 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 ADCY8P40145 1251 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 STC1P52823 247 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 MAZP56270 477 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 CFHR1Q03591 330 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 LRP8Q14114 963 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 IHHQ14623 411 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 TAF1BQ53T94 588 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 VSIG1Q86XK7 387 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 CPNE8Q86YQ8 564 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 JAMLQ86YT9 394 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 CCDC13Q8IYE1 715 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 NAGSQ8N159 534 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 SCAMP4Q969E2 229 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 COX14Q96I36 57 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 RNF157Q96PX1 679 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 OR2M4Q96R27 311 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 CCNL2Q96S94 520 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 B3GNT4Q9C0J1 378 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 RAB17Q9H0T7 212 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 SUDS3Q9H7L9 328 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 MED4Q9NPJ6 270 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 DTLQ9NZJ0 730 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 PISDQ9UG56 409 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 CHKBQ9Y259 395 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 TTLL3Q9Y4R7 772 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 ST14Q9Y5Y6 855 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
TRAPPC9-206ENST00000519482 ZNF462Q96JM2 2506 aa12.36□□□□□ -0.43
TRAPPC9-206ENST00000519482 A0A0U1RQS6 177 aa12.36□□□□□ -0.43
TRAPPC9-206ENST00000519482 RGSL1A5PLK6 1076 aa12.36□□□□□ -0.43
TRAPPC9-206ENST00000519482 PSTPIP1O43586 416 aa12.36□□□□□ -0.43
TRAPPC9-206ENST00000519482 CLDN7O95471 211 aa12.36□□□□□ -0.43
TRAPPC9-206ENST00000519482 LIPCP11150 499 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms