RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
HDAC3-215ENST00000519474 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC187A0A096LP49 1063 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CDRT15L2A8MXV6 281 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 F5H423 210 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CHUKO15111 745 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 GRID2O43424 1007 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A9O60656 530 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 TNFSF15O95150 251 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 IPO7O95373 1038 aaKnown RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RBP3P10745 1247 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A6P19224 532 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A1P22309 533 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A4P22310 534 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CA5AP35218 305 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 PTPN7P35236 360 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A3P35503 534 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A5P35504 534 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 HMGCLP35914 325 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 PEX19P40855 299 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ACTR1BP42025 376 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 INHBCP55103 352 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 EIF3EP60228 445 aaKnown RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ACTR1AP61163 376 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CFHR1Q03591 330 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CCDC173Q0VFZ6 552 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 SLC1A5Q15758 541 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 C3orf38Q5JPI3 329 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ANKRD20A2Q5SQ80 823 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ANKRD20A1Q5TYW2 823 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ANKRD20A3Q5VUR7 823 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ALS2CLQ60I27 953 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 IYDQ6PHW0 289 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RAB11FIP2Q7L804 512 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ADGRG6Q86SQ4 1221 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 KIAA1328Q86T90 577 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 PDZD3Q86UT5 571 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 TRAM1L1Q8N609 369 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 WDR36Q8NI36 951 aaKnown RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RNF217Q8TC41 542 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 LIN37Q96GY3 246 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 NAF1Q96HR8 494 aaKnown RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 TMEM74Q96NL1 305 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 SRPK1Q96SB4 655 aaKnown RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 FAM118BQ9BPY3 351 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 DESI2Q9BSY9 194 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 FOXP3Q9BZS1 431 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CDH19Q9H159 772 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 CARD9Q9H257 536 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 SEMA6CQ9H3T2 930 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RMI1Q9H9A7 625 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A7Q9HAW7 530 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A10Q9HAW8 530 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 UGT1A8Q9HAW9 530 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 IL26Q9NPH9 171 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RAD18Q9NS91 495 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 IL17CQ9P0M4 197 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 KLHL8Q9P2G9 620 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 NFKBIL1Q9UBC1 381 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-215ENST00000519474 TBC1D29Q9UFV1 150 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 SLC23A2Q9UGH3 650 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 USP24Q9UPU5 2620 aa9.25□□□□□ -0.93
HDAC3-215ENST00000519474 RHPN2P1A8MT19 583 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 D6RAR5 112 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 TMX2-CTNND1H3BSU7 103 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 RRP8O43159 456 aaKnown RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 BUD23O43709 281 aaKnown RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 RBMS1P29558 406 aaKnown RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 CCKBRP32239 447 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 ADRA1AP35348 466 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 GPR3P46089 330 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 CLCNKAP51800 687 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 DCDC1P59894 354 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 KIF5AQ12840 1032 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 TMEM115Q12893 351 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 MPP3Q13368 585 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PEX6Q13608 980 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 LRP8Q14114 963 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PTPRCAPQ14761 206 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 AMZ1Q400G9 498 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 ATP13A5Q4VNC0 1218 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 KHDC1Q4VXA5 237 aaKnown RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 NKAIN2Q5VXU1 208 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 DARS2Q6PI48 645 aaKnown RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 LRRC69Q6ZNQ3 347 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PEX26Q7Z412 305 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PIM3Q86V86 326 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 GALNT13Q8IUC8 556 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 SPACA3Q8IXA5 215 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 PIAS4Q8N2W9 510 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-215ENST00000519474 SFRP1Q8N474 314 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 FBXO39Q8N4B4 442 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 DTX3LQ8TDB6 740 aa9.24□□□□□ -0.93
HDAC3-215ENST00000519474 GLYATL1Q969I3 302 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms