RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 SLC26A9Q7LBE3 791 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 VPS36Q86VN1 386 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 GKN2Q86XP6 184 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 HID1Q8IV36 788 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ARHGEF19Q8IW93 802 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 BMPERQ8N8U9 685 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 MNS1Q8NEH6 495 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF397Q8NF99 534 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ENOX1Q8TC92 643 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 JPH3Q8WXH2 748 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 CCDC47Q96A33 483 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ARHGEF26Q96DR7 871 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 PGAP3Q96FM1 320 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 CPXM1Q96SM3 734 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 NPY6RQ99463 290 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 NUDT22Q9BRQ3 303 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 APOOQ9BUR5 198 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 DDA1Q9BW61 102 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 FAM204AQ9H8W3 233 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ACP6Q9NPH0 428 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ST7Q9NRC1 585 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 MPP6Q9NZW5 540 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 PDP2Q9P2J9 529 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 LRIT1Q9P2V4 623 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 DKK3Q9UBP4 350 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 DAAM1Q9Y4D1 1078 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 NAV3Q8IVL0 2385 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 AKAP9Q99996 3911 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 DIDO1Q9BTC0 2240 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SYNJ2BP-COX16A0A087WUM0 186 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TMEM202A6NGA9 273 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 AGRPO00253 132 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 POP4O95707 220 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 GSRP00390 522 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PRKCGP05129 697 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 KRT7P08729 469 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 HOXC4P09017 264 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 OR1E1P30953 314 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TRIM23P36406 574 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PRCPP42785 496 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 LIMK2P53671 638 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 OR1D5P58170 312 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 FKBP3Q00688 224 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 GNA12Q03113 381 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 CDC20Q12834 499 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TRA2AQ13595 282 aaKnown RBP eCLIP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SEPT6Q14141 434 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 INPP5AQ14642 412 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 LRRC14Q15048 493 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 NKG7Q16617 165 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 ARHGAP44Q17R89 818 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 KLHL40Q2TBA0 621 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 MYLK3Q32MK0 819 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 LACTB2Q53H82 288 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 DCAF17Q5H9S7 520 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 BRMS1LQ5PSV4 323 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SNAP47Q5SQN1 464 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PHF19Q5T6S3 580 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 ACBD5Q5T8D3 534 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 RETSATQ6NUM9 610 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TCTN3Q6NUS6 607 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 FOXR2Q6PJQ5 311 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 ENPP7Q6UWV6 458 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 RRAGAQ7L523 313 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TIPARPQ7Z3E1 657 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PIM3Q86V86 326 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 NRROSQ86YC3 692 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 CREG2Q8IUH2 290 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 HSCBQ8IWL3 235 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 CACNA2D3Q8IZS8 1091 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 LILRA2Q8N149 483 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PPM1KQ8N3J5 372 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 RCBTB1Q8NDN9 531 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 OR2AP1Q8NGE2 309 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 OR6K2Q8NGY2 324 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SSC4DQ8WTU2 575 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 APOBEC4Q8WW27 367 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 OR1E3Q8WZA6 343 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 ARHGEF2Q92974 986 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PDXPQ96GD0 296 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 TKTL2Q9H0I9 626 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SIK2Q9H0K1 926 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 UPF2Q9HAU5 1272 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 RDH14Q9HBH5 336 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 FGF22Q9HCT0 170 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 COX16Q9P0S2 106 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 PPARGC1AQ9UBK2 798 aaKnown RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 ARMCX3Q9UH62 379 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 NEU3Q9UQ49 428 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.02□□□□□ -1.45
PABPC1-207ENST00000518716 MFHAS1Q9Y4C4 1052 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 HIVEP1P15822 2718 aa6.02□□□□□ -1.45
PABPC1-207ENST00000518716 SEC16AO15027 2179 aa6.01□□□□□ -1.45
PABPC1-207ENST00000518716 APCP25054 2843 aa6.01□□□□□ -1.45
PABPC1-207ENST00000518716 LOC101059948A0A1B0GTJ6 334 aa6.01□□□□□ -1.45
PABPC1-207ENST00000518716 TSPAN11A1L157 253 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms