RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PON2Q15165 354 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 INAVAQ3KP66 663 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 FBXO48Q5FWF7 155 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 FGD3Q5JSP0 725 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 UBAP2Q5T6F2 1119 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MROH9Q5TGP6 573 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 BROXQ5VW32 411 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TYW3Q6IPR3 259 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ERICH5Q6P6B1 374 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ALKBH5Q6P6C2 394 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 NAPRTQ6XQN6 538 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 DPY19L3Q6ZPD9 716 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 GPRIN3Q6ZVF9 776 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 UTS2BQ765I0 119 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADAT2Q7Z6V5 191 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 LHFPL3Q86UP9 236 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 NT5DC3Q86UY8 548 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 AMIGO1Q86WK6 493 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADGRG3Q86Y34 549 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 RHPN2Q8IUC4 686 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CADM2Q8N3J6 435 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 POC5Q8NA72 575 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 GSTCDQ8NEC7 633 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR8H1Q8NGG4 311 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR13F1Q8NGS4 319 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 RNASE11Q8TAA1 199 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 SH3RF3Q8TEJ3 882 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ASZ1Q8WWH4 475 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 POMGNT1Q8WZA1 660 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 HDAC2Q92769 488 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 PROX1Q92786 737 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNAPC3Q92966 411 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMIGD2Q96BF3 282 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 AP2M1Q96CW1 435 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMCO6Q96DC7 493 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MTERF3Q96E29 417 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 DUS3LQ96G46 650 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MSANTD3Q96H12 275 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 RBM18Q96H35 190 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 BTN2A3PQ96KV6 586 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 RILPQ96NA2 401 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 RTKNQ9BST9 563 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMEM121Q9BTD3 319 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 PDCD10Q9BUL8 212 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MND1Q9BWT6 205 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC8Q9H0W5 538 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 XYLT2Q9H1B5 865 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 WNT8AQ9H1J5 351 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ABCG8Q9H221 673 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MMP27Q9H306 513 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 KCTD10Q9H3F6 313 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CNTD2Q9H8S5 307 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 LY9Q9HBG7 655 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 NCOA5Q9HCD5 579 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 PNPLA8Q9NP80 782 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CABP5Q9NP86 173 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 BIN3Q9NQY0 253 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TBC1D22BQ9NU19 505 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 DNAJC11Q9NVH1 559 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 PSMC3IPQ9P2W1 217 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 MTRRQ9UBK8 725 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYB5R1Q9UHQ9 305 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 CYTH4Q9UIA0 394 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLHL21Q9UJP4 597 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZFR2Q9UPR6 939 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 JAG2Q9Y219 1238 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLHL20Q9Y2M5 609 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 GMPPBQ9Y5P6 360 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRPV2Q9Y5S1 764 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 COPG1Q9Y678 874 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 AUP1Q9Y679 476 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 FKBP7Q9Y680 259 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 PTCH2Q9Y6C5 1203 aa4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 ARHGEF28Q8N1W1 1705 aaKnown RBP4.79□□□□□ -1.64
HMGB1P19-201ENST00000517578 METP08581 1390 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PIK3C2AO00443 1686 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 C1orf167Q5SNV9 1468 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A1B0GW55 424 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM92AA1XBS5 289 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCDC182A6NF36 153 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ACOD1A6NK06 481 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 E9PAM4 449 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 H7C2Y5 167 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 KPNA3O00505 521 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 AURKAO14965 403 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PER2O15055 1255 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SMAD7O15105 426 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPM1DO15297 605 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RGS5O15539 181 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SYNCRIPO60506 623 aaKnown RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 DTNBO60941 627 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF780AO75290 641 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 SEC14L2O76054 403 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 RASGRP1O95267 797 aa4.78□□□□□ -1.64
HMGB1P19-201ENST00000517578 VNN1O95497 513 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms