RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PPP1R3AQ16821 1122 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 COQ5Q5HYK3 327 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 FGD3Q5JSP0 725 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DENND5AQ6IQ26 1287 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 AFTPHQ6ULP2 937 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GCNT7Q6ZNI0 430 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TFAP2DQ7Z6R9 452 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF605Q86T29 641 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ARMC8Q8IUR7 673 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SLC15A3Q8IY34 581 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SLC15A4Q8N697 577 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 OR4L1Q8NH43 312 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 OR5K1Q8NHB7 308 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SLC16A10Q8TF71 515 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MYRFLQ96LU7 910 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TEKT2Q9UIF3 430 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TIMM13Q9Y5L4 95 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 LOC100506127A0A0U1RQW1 187 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SLC28A1O00337 649 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GABRDO14764 452 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 C22orf31O95567 290 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SNAP29O95721 258 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 FADS2O95864 444 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HMBSP08397 361 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HDCP19113 662 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HLA-DPA1P20036 260 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DCKP27707 260 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ARSFP54793 590 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DAOAP59103 153 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MCCD1P59942 119 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 PURAQ00577 322 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GALNT1Q10472 559 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 LRP8Q14114 963 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CYP2U1Q7Z449 544 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CENPIQ92674 756 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MUS81Q96NY9 551 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 NPY6RQ99463 290 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 KATNAL1Q9BW62 490 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GPR63Q9BZJ6 419 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CLPBQ9H078 707 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TFB2MQ9H5Q4 396 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DYRK4Q9NR20 520 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 PIGVQ9NUD9 493 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 OLAHQ9NV23 265 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 EHD3Q9NZN3 535 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ZIM2Q9NZV7 527 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MPP6Q9NZW5 540 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 RNF11Q9Y3C5 154 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TIMM22Q9Y584 194 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 XIRP1Q702N8 1843 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 OTCP00480 354 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HPRP00739 348 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HOXD12P35452 270 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ERVK-8P63133 956 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 IL18R1Q13478 541 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TRIP4Q15650 581 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 HSF5Q4G112 596 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TECRLQ5HYJ1 363 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 BNIPLQ7Z465 357 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 R3HCC1LQ7Z5L2 792 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 KCTD13Q8WZ19 329 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MOCOSQ96EN8 888 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF512Q96ME7 567 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MINDY3Q9H8M7 445 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CACYBPQ9HB71 228 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ZC4H2Q9NQZ6 224 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DUSP12Q9UNI6 340 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SAMD4AQ9UPU9 718 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SMIM28A0A1B0GU29 152 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 RPP40O75818 363 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 FTH1P02794 183 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 NTRK1P04629 796 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 WARSP23381 471 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 LMO2P25791 158 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 GSTM2P28161 218 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 IL12RB1P42701 662 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 PIK3CGP48736 1102 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 BMXP51813 675 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TBX4P57082 545 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 MVKQ03426 396 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ATAD3BQ5T9A4 648 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 DEPDC1Q5TB30 811 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SYPL2Q5VXT5 272 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SHQ1Q6PI26 577 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CLEC14AQ86T13 490 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 CMTR2Q8IYT2 770 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 SMG8Q8ND04 991 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ISL2Q96A47 359 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 EFHD2Q96C19 240 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM209Q96SK2 561 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ADGRE3Q9BY15 652 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 FBRSL1Q9HCM7 1045 aaKnown RBP6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ADPRHL2Q9NX46 363 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 ZMYM5Q9UJ78 669 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 NRCAMQ92823 1304 aa6.62□□□□□ -1.35
CPNE3-203ENST00000517490 IGKV6D-21A0A0A0MT36 114 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 EFCAB10A6NFE3 127 aa6.61□□□□□ -1.35
CPNE3-203ENST00000517490 B3GAT3O94766 335 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms