RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 COPS8Q99627 209 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CXorf21Q9HAI6 301 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TRMT13Q9NUP7 481 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 FADS3Q9Y5Q0 445 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ADAMTSL1Q8N6G6 1762 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 NEMP2A6NFY4 417 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 C9JVG2 144 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 H3BMM5 538 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CNOT3O75175 753 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 RNASEH2AO75792 299 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 PBX3P40426 434 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TIGD2Q4W5G0 525 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 STEAP4Q687X5 459 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ESRP1Q6NXG1 681 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 GPRIN3Q6ZVF9 776 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 OR7D4Q8NG98 312 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 COL26A1Q96A83 441 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 FCRL3Q96P31 734 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 BBS4Q96RK4 519 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 A0A0J9YYE9 177 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ARHGEF9O43307 516 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 LRATO95237 230 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 KRT8P05787 483 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ADH1AP07327 375 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CDK9P50750 372 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 PRKG2Q13237 762 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 RGS21Q2M5E4 152 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 RAET1GQ6H3X3 334 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 PAOXQ6QHF9 649 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 VN1R5Q7Z5H4 357 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TMEM126BQ8IUX1 230 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 OFCC1Q8IZS5 231 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CLYBLQ8N0X4 340 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 UGT2B28Q9BY64 529 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 GNPTGQ9UJJ9 305 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 SLX4Q8IY92 1834 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ANKDD1BA6NHY2 528 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 PPEF2O14830 753 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 MLYCDO95822 493 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 SLC7A1P30825 629 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CORO1AP31146 461 aaKnown RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 AIF1P55008 147 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 NRG1Q02297 640 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 BNIP2Q12982 314 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 SYPL2Q5VXT5 272 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 OTOP2Q7RTS6 562 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 CYP4Z1Q86W10 505 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 DBF4BQ8NFT6 615 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 HEXDCQ8WVB3 486 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZNF778Q96MU6 729 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 HAPLN3Q96S86 360 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 HBEGFQ99075 208 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 ADI1Q9BV57 179 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 KLHL25Q9H0H3 589 aa10.78□□□□□ -0.68
PCDHGA1-202ENST00000517417 C9IYK1 514 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DLX3O60479 287 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 SNAP91O60641 907 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 IPO13O94829 963 aaKnown RBP10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 CCNA2P20248 432 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 SERPINB1P30740 379 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 CRATP43155 626 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 GPR1P46091 355 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 PGGT1BP53609 377 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 GJA9P57773 515 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DAOAP59103 153 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DEFA1P59665 94 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DEFA3P59666 94 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DGCR6Q14129 220 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 ZNF423Q2M1K9 1284 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 GPR158Q5T848 1215 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 TYW3Q6IPR3 259 aaKnown RBP10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 SLC35F5Q8WV83 523 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 DGCR6LQ9BY27 220 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.68
PCDHGA1-202ENST00000517417 KPNA4O00629 521 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 HCRTO43612 131 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC25A14O95258 325 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CAPZA2P47755 286 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 IDH2P48735 452 aaKnown RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 PGM2L1Q6PCE3 622 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 ADAMTSL2Q86TH1 951 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 BRI3BPQ8WY22 251 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 RHBGQ9H310 441 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CFAP97Q9P2B7 532 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 COL2A1P02458 1487 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 NPHS1O60500 1241 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 EPN2O95208 641 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 IL4RP24394 825 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 MYBPC3Q14896 1274 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 TIGD5Q53EQ6 642 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 ALFQ53S48 1182 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 CYS1Q717R9 158 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 HM13Q8TCT9 377 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 COX4I2Q96KJ9 171 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 ACBD6Q9BR61 282 aa10.77□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC39A3Q9BRY0 314 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms