RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CNDP2Q96KP4 475 aaKnown RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 SPATA17Q96L03 361 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 INPP4AQ96PE3 977 aaPredicted RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 OR1F2PQ96R84 312 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 NR1H4Q96RI1 486 aaPredicted RBP3.23□□□□□ -1.89
HERC4-215ENST00000515753 SH3GL2Q99962 352 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 FAM110AQ9BQ89 295 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ADPGKQ9BRR6 497 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 HAUS8Q9BT25 410 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 EDEM3Q9BZQ6 932 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ZWILCHQ9H900 591 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 PCDH9Q9HC56 1237 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 MAGEE1Q9HCI5 957 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 MCM9Q9NXL9 1143 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ZNF224Q9NZL3 707 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 C1RLQ9NZP8 487 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 SARDHQ9UL12 918 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 CDC14AQ9UNH5 594 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 TRAPPC8Q9Y2L5 1435 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 FAM96BQ9Y3D0 163 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 PIAS3Q9Y6X2 628 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 WDR81Q562E7 1941 aa3.23□□□□□ -1.89
HERC4-215ENST00000515753 ABCA9Q8IUA7 1624 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 IQSEC2Q5JU85 1478 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 ZNF518AQ6AHZ1 1483 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 UTYO14607 1347 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 ATXN2Q99700 1313 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 A0A0B4J293 547 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 NPIPB15A6NHN6 443 aaPredicted RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 PTGES3LE9PB15 166 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PLRG1O43660 514 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 ZIC3O60481 467 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SEC14L2O76054 403 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 CSPG5O95196 566 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PGM3O95394 542 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PMS2P2O95744 297 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SRCP12931 536 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 CDAP32320 146 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PIGAP37287 484 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 HARS2P49590 506 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 BRWD1-AS2P59051 145 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 AIMP2Q13155 320 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 TNFAIP1Q13829 316 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SLC9B1Q4ZJI4 515 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PLEKHS1Q5SXH7 462 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 LRRC8EQ6NSJ5 796 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 ANKRD54Q6NXT1 300 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 RHBDF2Q6PJF5 856 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 CPLX2Q6PUV4 134 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 IKBIPQ70UQ0 350 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 AFAP1L1Q8TED9 768 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SCFD2Q8WU76 684 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 MTBPQ96DY7 904 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SAAL1Q96ER3 474 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SLC41A2Q96JW4 573 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 KLHL15Q96M94 604 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 BBS4Q96RK4 519 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PKP4Q99569 1192 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 MXD3Q9BW11 206 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 GLIS2Q9BZE0 524 aaPredicted RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 USP44Q9H0E7 712 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SLC25A18Q9H1K4 315 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 UBTD1Q9HAC8 227 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 SLC9A2Q9UBY0 812 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 CHORDC1Q9UHD1 332 aaPredicted RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 SIX4Q9UIU6 781 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 ZNF215Q9UL58 517 aaPredicted RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 PCDHGB4Q9UN71 923 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 PPRC1Q5VV67 1664 aaKnown RBP3.22□□□□□ -1.89
HERC4-215ENST00000515753 ZFYVE16Q7Z3T8 1539 aa3.22□□□□□ -1.89
HERC4-215ENST00000515753 NPATQ14207 1427 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 ZMYM4Q5VZL5 1548 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 TMEM202A6NGA9 273 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 USP17L23D6RBM5 183 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 CLGNO14967 610 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 BCAT2O15382 392 aaPredicted RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 TBCAO75347 108 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 ERAL1O75616 437 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 BEST1O76090 585 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 HSPA4LO95757 839 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 BAG2O95816 211 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 UMODP07911 640 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 OAS2P29728 719 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 SSTR2P30874 369 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 STX2P32856 288 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 ACSL1P33121 698 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 CPOXP36551 454 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 RGS2P41220 211 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 FASLGP48023 281 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 EIF3BP55884 814 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 ITGADQ13349 1161 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 DCTN2Q13561 401 aaKnown RBP3.21□□□□□ -1.9
HERC4-215ENST00000515753 TDGQ13569 410 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 SCARB2Q14108 478 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 SLC39A14Q15043 492 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 MRGPRG-AS1Q2M3A8 158 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 USP41Q3LFD5 358 aa3.21□□□□□ -1.9
HERC4-215ENST00000515753 MMEL1Q495T6 779 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms