RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ZC3H18Q86VM9 953 aaKnown RBP13.53□□□□□ -0.24
TCOF1-215ENST00000515516 SFRP1Q8N474 314 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 TRAM1L1Q8N609 369 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 AVL9Q8NBF6 648 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 OR4D9Q8NGE8 314 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 USP7Q93009 1102 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 TADA1Q96BN2 335 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 CCDC74BQ96LY2 380 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 VAT1Q99536 393 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 NUDT22Q9BRQ3 303 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 HERPUD2Q9BSE4 406 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 OR2AG1Q9H205 316 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 TRIM39Q9HCM9 518 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 KCNK6Q9Y257 313 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
TCOF1-215ENST00000515516 LRRK1Q38SD2 2015 aa13.52□□□□□ -0.24
TCOF1-215ENST00000515516 PRAMEF33A0A0G2JMD5 474 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 IGHV5-10-1A0A0J9YXX1 117 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 OR5K4A6NMS3 321 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 HACD1B0YJ81 288 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 K7ENP7 123 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 DUX1O43812 170 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 NUAK1O60285 661 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 LIPCP11150 499 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 PECAM1P16284 738 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF8P17098 575 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-215ENST00000515516 CD82P27701 267 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 LIMK2P53671 638 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 NFATC2Q13469 925 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 SQSTM1Q13501 440 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 FAM182AQ5T1J6 154 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 ZDHHC20Q5W0Z9 365 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 C11orf63Q6NUN7 778 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 IYDQ6PHW0 289 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 INO80CQ6PI98 192 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-215ENST00000515516 TMTC1Q8IUR5 882 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 AGBL5Q8NDL9 886 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 RCBTB1Q8NDN9 531 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 GPR26Q8NDV2 337 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 GLYATL1Q969I3 302 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 HAUS1Q96CS2 278 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 PANX2Q96RD6 677 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.52□□□□□ -0.25
TCOF1-215ENST00000515516 B3GNT4Q9C0J1 378 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 GOLPH3Q9H4A6 298 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 TRABDQ9H4I3 376 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 ARFGAP3Q9NP61 516 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.25
TCOF1-215ENST00000515516 TBC1D29Q9UFV1 150 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 ACSL6Q9UKU0 697 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 TRHDEQ9UKU6 1024 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.25
TCOF1-215ENST00000515516 hCG_1818297A0A087WSY0 165 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 KIR2DS5A0A0G2JLQ3 304 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 A0A0G2JNG1 304 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 H7C0C1 242 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 KIR2DS3K7RE56 304 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 VEGFDO43915 354 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 EPOP01588 193 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 NFKB1P19838 968 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 MPSTP25325 297 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 CTNNA2P26232 953 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ETV5P41161 510 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 CETN2P41208 172 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ATP5OP48047 213 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 WNT3AP56704 352 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 GTF2H3Q13889 308 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 KIR2DS5Q14953 304 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 INSCQ1MX18 579 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 MANEAQ5SRI9 462 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 TMEM71Q6P5X7 295 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF574Q6ZN55 896 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ZNF761Q86XN6 746 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-215ENST00000515516 SLC25A41Q8N5S1 370 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ZSCAN1Q8NBB4 408 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 GDAP1Q8TB36 358 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 HTR3CQ8WXA8 447 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 EID2BQ96D98 161 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 WBP1Q96G27 269 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 FCRL5Q96RD9 977 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 TAAR9Q96RI9 348 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 OSGEPL1Q9H4B0 414 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 BPIFA1Q9NP55 256 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 KLC4Q9NSK0 619 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 NFKBIL1Q9UBC1 381 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-215ENST00000515516 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 EPN1Q9Y6I3 576 aaPredicted RBP13.51□□□□□ -0.25
TCOF1-215ENST00000515516 ANKRD36A6QL64 1941 aa13.51□□□□□ -0.25
TCOF1-215ENST00000515516 KMOO15229 486 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 CDK14O94921 469 aa13.5□□□□□ -0.25
TCOF1-215ENST00000515516 NDUFA10O95299 355 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms