RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PRLRP16471 622 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 UBA1P22314 1058 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 KELP23276 732 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ITGB8P26012 769 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 PON1P27169 355 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 HOXD9P28356 352 aaPredicted RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ME1P48163 572 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SIRPAP78324 504 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 PMPCAQ10713 525 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 IRF3Q14653 427 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 NTRK2Q16620 822 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 CDONQ4KMG0 1287 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 AWAT1Q58HT5 328 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 FAM122CQ6P4D5 195 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 CPLX2Q6PUV4 134 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SZRD1Q7Z422 152 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 FOXRED2Q8IWF2 684 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC35F5Q8WV83 523 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ATL1Q8WXF7 558 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 TMEM47Q9BQJ4 181 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 VEZTQ9HBM0 779 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 CD93Q9NPY3 652 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 IL1RAPL1Q9NZN1 696 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 TBC1D29Q9UFV1 150 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 IPO11Q9UI26 975 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 UTS2RQ9UKP6 389 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SESN1Q9Y6P5 492 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 AKAP11Q9UKA4 1901 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 MAP2P11137 1827 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 IGLV5-39A0A0G2JS06 123 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 TEX13CA0A0J9YWL9 993 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 A0A1B0GVM2 712 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 KANSL1LA0AUZ9 987 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 LNP1A1A4G5 178 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 MAP2K7O14733 419 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SEC14L5O43304 696 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 UGDHO60701 494 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 GLUD1P00367 558 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 MAP2K2P36507 400 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 GARSP41250 739 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 CPA2P48052 419 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 GLUD2P49448 558 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SEC61BP60468 96 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SEC61A1P61619 476 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SLC20A2Q08357 652 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 DSC1Q08554 894 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 KLHL35Q6PF15 583 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 RBPMS2Q6ZRY4 209 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 RBM23Q86U06 439 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 TBC1D26Q86UD7 250 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ANKRD13BQ86YJ7 626 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 GCSAMQ8N6F7 178 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SCFD2Q8WU76 684 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 CUL5Q93034 780 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 TMEM39BQ9GZU3 492 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 RIOX1Q9H6W3 641 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ANKEF1Q9NU02 776 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 WNT16Q9UBV4 365 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 DNAJB4Q9UDY4 337 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 OSGIN1Q9UJX0 560 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SRPRBQ9Y5M8 271 aaKnown RBP1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 SQORQ9Y6N5 450 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 LOC400499M0QZD8 3231 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 DOT1LQ8TEK3 1739 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 USP24Q9UPU5 2620 aa1.71□□□□□ -2.14
AC025539.1-201ENST00000515343 ANKRD26Q9UPS8 1709 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 FAM90A10PA6NDY2 464 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 CXorf65A6NEN9 183 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 UBE2CO00762 179 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 PPEF2O14830 753 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 LDB2O43679 373 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 FSHBP01225 129 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 CSH1P0DML2 217 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 CSH2P0DML3 217 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 PORP16435 677 aaPredicted RBP1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 TMEM11P17152 192 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 HMGA2P52926 109 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 KRTAP10-11P60412 298 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 SREBF2Q12772 1141 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 KRT32Q14532 448 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 NR1D2Q14995 579 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 ALG10Q5BKT4 473 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 ALG10BQ5I7T1 473 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 C6orf10Q5SRN2 563 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 UBAP2Q5T6F2 1119 aaKnown RBP1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 GARNL3Q5VVW2 1013 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 DCAF12L2Q5VW00 463 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 C9orf47Q6ZRZ4 202 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 GET4Q7L5D6 327 aaPredicted RBP1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 RNF144BQ7Z419 303 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 DUSP19Q8WTR2 217 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 KCNJ9Q92806 393 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 CRAMP1Q96RY5 1269 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 IFT27Q9BW83 186 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 C1QTNF5Q9BXJ0 243 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 QTRT1Q9BXR0 403 aaKnown RBP1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 ISCUQ9H1K1 167 aa1.7□□□□□ -2.14
AC025539.1-201ENST00000515343 MAGEE1Q9HCI5 957 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms