RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 SMAD3P84022 425 aaKnown RBP14.74□□□□□ -0.05
NUP54-217ENST00000514987 BNIP2Q12982 314 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 IKBKEQ14164 716 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 ARMC12Q5T9G4 340 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 LYPLAL1Q5VWZ2 237 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 PSAPL1Q6NUJ1 521 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 ITIH5Q86UX2 942 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 PHYKPLQ8IUZ5 450 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 FUNDC1Q8IVP5 155 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 CARNMT1Q8N4J0 409 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 DCAF4L2Q8NA75 395 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 KLHL32Q96NJ5 620 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 TSC22D3Q99576 134 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 MUC13Q9H3R2 512 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 RIC8BQ9NVN3 520 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 NUDT4Q9NZJ9 180 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 NDUFA13Q9P0J0 144 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 IL17CQ9P0M4 197 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 POLG2Q9UHN1 485 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 ZNF711Q9Y462 761 aa14.74□□□□□ -0.05
NUP54-217ENST00000514987 TNPO3Q9Y5L0 923 aaKnown RBP14.74□□□□□ -0.05
NUP54-217ENST00000514987 C2orf78A6NCI8 922 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 NPEPPSL1A6NEC2 478 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CDC7O00311 574 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TXNDC9O14530 226 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PQBP1O60828 265 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 CD160O95971 181 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PRR35P0CG20 571 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PRSS56P0CW18 603 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 HGFP14210 728 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CHRM3P20309 590 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 MSX2P35548 267 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 HMGCLP35914 325 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CSNK1DP48730 415 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 RETSATQ6NUM9 610 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CNKSR3Q6P9H4 555 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TAS2R42Q7RTR8 314 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 DHFR2Q86XF0 187 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PIANPQ8IYJ0 282 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TCEAL8Q8IYN2 117 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CD200R1Q8TD46 325 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 LINGO1Q96FE5 620 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TMEM169Q96HH4 297 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 SCLYQ96I15 445 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 NSUN5Q96P11 429 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 GCNAQ96QF7 691 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 ZNF382Q96SR6 550 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 UHRF1Q96T88 793 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 PKP2Q99959 881 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 GPATCH1Q9BRR8 931 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 HGH1Q9BTY7 390 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 C2orf49Q9BVC5 232 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 GPR63Q9BZJ6 419 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 YIPF3Q9GZM5 350 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 P2RY12Q9H244 342 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 FBRSL1Q9HCM7 1045 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 CD274Q9NZQ7 290 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 DNMT3BQ9UBC3 853 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 ABCD2Q9UBJ2 740 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PCTPQ9UKL6 214 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 ZNF510Q9Y2H8 683 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 DHRS7Q9Y394 339 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 OR51B4Q9Y5P0 310 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 MICAL3Q7RTP6 2002 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 DYTNA2CJ06 578 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PRORSD1PA6NEY8 169 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 LRRC14BA6NHZ5 514 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 GFRA2O00451 464 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 NR5A2O00482 541 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 PRMT5O14744 637 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 SNAP91O60641 907 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TSPAN12O95859 305 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 S100BP04271 92 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 ZCCHC18P0CG32 403 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 HSD17B1P14061 328 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TCN1P20061 433 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 RPS3P23396 243 aaKnown RBP eCLIP14.73□□□□□ -0.05
NUP54-217ENST00000514987 TWF1Q12792 350 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 CTSL3PQ5NE16 218 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 SPOUT1Q5T280 376 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 BLOC1S3Q6QNY0 202 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 UGT2A3Q6UWM9 527 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 GPRIN3Q6ZVF9 776 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 ADAMTSL2Q86TH1 951 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 FAM217AQ8IXS0 508 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 GPR65Q8IYL9 337 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 LILRA2Q8N149 483 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TMEM102Q8N9M5 508 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 MYO19Q96H55 970 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 TUBB1Q9H4B7 451 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 SEMA4BQ9NPR2 832 aaPredicted RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 VPS51Q9UID3 782 aa14.73□□□□□ -0.05
NUP54-217ENST00000514987 LSM7Q9UK45 103 aaKnown RBP14.73□□□□□ -0.05
NUP54-217ENST00000514987 TET1Q8NFU7 2136 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 ANAPC1Q9H1A4 1944 aa14.72□□□□□ -0.05
NUP54-217ENST00000514987 CXorf51AA0A1B0GTR3 108 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms