RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 TEDDM1Q5T9Z0 273 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 RAET1GQ6H3X3 334 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PSAPL1Q6NUJ1 521 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 TRMT10BQ6PF06 316 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 MARK2Q7KZI7 788 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PIANPQ8IYJ0 282 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 TMEFF1Q8IYR6 380 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PELI3Q8N2H9 469 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 MFSD2AQ8NA29 543 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PLA2G15Q8NCC3 412 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 C2CD4AQ8NCU7 369 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 CDKL2Q92772 493 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 HIC2Q96JB3 615 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 BMFQ96LC9 184 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 CYTH2Q99418 400 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 AGAP2Q99490 1192 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 TTC1Q99614 292 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 MCMBPQ9BTE3 642 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 ASB8Q9H765 288 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 VPS37BQ9H9H4 285 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PPCSQ9HAB8 311 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PHPT1Q9NRX4 125 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 INTS10Q9NVR2 710 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 VPS18Q9P253 973 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 RABGEF1Q9UJ41 708 aa11.88□□□□□ -0.51
PDLIM5-220ENST00000514830 PI4KAP42356 2102 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 A0A1W2PR77 199 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 POM121BA6NF01 834 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 OR51F1A6NGY5 319 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 MEI4A8MW99 385 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 PRR5-ARHGAP8B1AHC4 643 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 VEGFDO43915 354 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 TCEA3O75764 348 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ACSL3O95573 720 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 NUDT17P0C025 328 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ERVK-10P10266 1014 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 MYCLP1P12525 358 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 SDHBP21912 280 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 HSD17B3P37058 310 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 PTGER3P43115 390 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 LEPRP48357 1165 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 CDK3Q00526 305 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 STAT4Q14765 748 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 UAP1Q16222 522 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 KLHL38Q2WGJ6 581 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ZRANB3Q5FWF4 1079 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 LYSMD4Q5XG99 296 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ZNF470Q6ECI4 717 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 DGLUCYQ7Z3D6 616 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 PTAR1Q7Z6K3 402 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 RABEPKQ7Z6M1 372 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 SERPINA9Q86WD7 417 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 LRRC6Q86X45 466 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 PHYKPLQ8IUZ5 450 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 UNC5BQ8IZJ1 945 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 FBF1Q8TES7 1133 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 KLK6Q92876 244 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 SCARF2Q96GP6 870 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 SERAC1Q96JX3 654 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 APOOQ9BUR5 198 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 WDR26Q9H7D7 661 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ARGLU1Q9NWB6 273 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ZDHHC3Q9NYG2 299 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 MARCH4Q9P2E8 410 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 SUSD2Q9UGT4 822 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 FBXO5Q9UKT4 447 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 CORO1CQ9ULV4 474 aaPredicted RBP11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 CACNA1AO00555 2505 aa11.87□□□□□ -0.51
PDLIM5-220ENST00000514830 GON4LQ3T8J9 2241 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 VILLO15195 856 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A9O60656 530 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 MAGEC1O60732 1142 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC25A14O95258 325 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 S1PR4O95977 384 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 PCCBP05166 539 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A6P19224 532 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A1P22309 533 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A4P22310 534 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 KELP23276 732 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 RPS3P23396 243 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A3P35503 534 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 UGT1A5P35504 534 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 NSG1P42857 185 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC1A2P43004 574 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 CDKN1CP49918 316 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 CSE1LP55060 971 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SRSF5Q13243 272 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SLC29A2Q14542 456 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 SEMA3AQ14563 771 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 NFATC4Q14934 902 aa11.86□□□□□ -0.51
PDLIM5-220ENST00000514830 RASA2Q15283 850 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms