RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PYCR3Q53H96 274 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 LVRNQ6Q4G3 990 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 ADGRG6Q86SQ4 1221 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 PHYKPLQ8IUZ5 450 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 SDR16C5Q8N3Y7 309 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 FAM181AQ8N9Y4 354 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 GPBAR1Q8TDU6 330 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 DNAJC1Q96KC8 554 aaKnown RBP13.82□□□□□ -0.2
USP46-209ENST00000514536 VPS35Q96QK1 796 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 OR2M4Q96R27 311 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 TRNAU1APQ9NX07 287 aaKnown RBP13.82□□□□□ -0.2
USP46-209ENST00000514536 TOR4AQ9NXH8 423 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 GPR34Q9UPC5 381 aa13.82□□□□□ -0.2
USP46-209ENST00000514536 APOBEC2Q9Y235 224 aaKnown RBP13.82□□□□□ -0.2
USP46-209ENST00000514536 PCYT1BQ9Y5K3 369 aaPredicted RBP13.82□□□□□ -0.2
USP46-209ENST00000514536 TCRBV7S3A2A0A539 114 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 ECEL1O95672 775 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 AK4P27144 223 aaPredicted RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 SESN2P58004 480 aaPredicted RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 DAB2P98082 770 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 XIAPP98170 497 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 CTBSQ01459 385 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 ILF3Q12906 894 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP46-209ENST00000514536 ITGA9Q13797 1035 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 KHDC1Q4VXA5 237 aaKnown RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 ZCCHC8Q6NZY4 707 aaKnown RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 NRROSQ86YC3 692 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 GALNT13Q8IUC8 556 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 FAM46DQ8NEK8 389 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 STYXQ8WUJ0 223 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 GSDMCQ9BYG8 508 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 ASB8Q9H765 288 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 RMI1Q9H9A7 625 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 NLE1Q9NVX2 485 aaPredicted RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.81□□□□□ -0.2
USP46-209ENST00000514536 SIRPGQ9P1W8 387 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 GULP1Q9UBP9 304 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 APPL1Q9UKG1 709 aa13.81□□□□□ -0.2
USP46-209ENST00000514536 TPRP12270 2363 aaKnown RBP13.8□□□□□ -0.2
USP46-209ENST00000514536 MROH6A6NGR9 719 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 NUAK1O60285 661 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 SRP72O76094 671 aaKnown RBP13.8□□□□□ -0.2
USP46-209ENST00000514536 CDK14O94921 469 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 PRAMEF1O95521 474 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 CKMT1AP12532 417 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 TPSB2P20231 275 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 ADRA1DP25100 572 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 HADHAP40939 763 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 PEX6Q13608 980 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 PPP1R7Q15435 360 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 TPSAB1Q15661 275 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 C6orf132Q5T0Z8 1188 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 MICALCLQ6ZW33 695 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
USP46-209ENST00000514536 CDKN2AIPNLQ96HQ2 116 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
USP46-209ENST00000514536 C19orf43Q9BQ61 176 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 FAM96AQ9H5X1 160 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
USP46-209ENST00000514536 ARID1BQ8NFD5 2236 aaPredicted RBP13.8□□□□□ -0.2
USP46-209ENST00000514536 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 HEATR9A2RTY3 570 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 CPED1A4D0V7 1026 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 GRID2O43424 1007 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 VEGFDO43915 354 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 PTGIRP43119 386 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ACADVLP49748 655 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 CDK16Q00536 496 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
USP46-209ENST00000514536 NFATC2Q13469 925 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 LAMB3Q13751 1172 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 KCNJ11Q14654 390 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 GPRC6AQ5T6X5 926 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ANKRD22Q5VYY1 191 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 LRRC8BQ6P9F7 803 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
USP46-209ENST00000514536 SLC35F3Q8IY50 421 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 CPT1BQ92523 772 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 GLMNQ92990 594 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 RANBP9Q96S59 729 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 DPEP2Q9H4A9 486 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 SPATS2LQ9NUQ6 558 aaKnown RBP13.79□□□□□ -0.2
USP46-209ENST00000514536 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 SLC30A1Q9Y6M5 507 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 U3KQA8 63 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ACP5P13686 325 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ITGALP20701 1170 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ACP1P24666 158 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 MC4RP32245 332 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 ACTR1BP42025 376 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 MAGEA6P43360 314 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 NPY2RP49146 381 aa13.79□□□□□ -0.2
USP46-209ENST00000514536 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms