RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 A0A0U1RQS6 177 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 C1orf232A0A0U1RR37 186 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 F5H423 210 aaPredicted RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 CACNB4O00305 520 aaPredicted RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 KCNK5O95279 499 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 C1QAP02745 245 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 CSF2P04141 144 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 PCCBP05166 539 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 PYGLP06737 847 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 HLA-DPA1P20036 260 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 KELP23276 732 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 PSMB4P28070 264 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 FDFT1P37268 417 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 GRK6P43250 576 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 SPINT3P49223 89 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 HNRNPKP61978 463 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCL28-204ENST00000514421 PDIA2Q13087 525 aaKnown RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 GALNT3Q14435 633 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 NFATC4Q14934 902 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 FASTKD3Q14CZ7 662 aaKnown RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 SLC1A5Q15758 541 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 TPRG1LQ5T0D9 272 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 RANBP10Q6VN20 620 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 ARHGEF18Q6ZSZ5 1173 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 TAOK1Q7L7X3 1001 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 PARGQ86W56 976 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 SLC22A18ASQ8N1D0 253 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 SLC25A41Q8N5S1 370 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 PLA2G15Q8NCC3 412 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 DEFB124Q8NES8 71 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 IPMKQ8NFU5 416 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 SETD7Q8WTS6 366 aaKnown RBP8.28□□□□□ -1.08
CCL28-204ENST00000514421 BTN2A2Q8WVV5 523 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 AP2M1Q96CW1 435 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 C9orf72Q96LT7 481 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 CDH19Q9H159 772 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 EPN3Q9H201 632 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 FAM83DQ9H4H8 585 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 ACSS3Q9H6R3 686 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 RAD18Q9NS91 495 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 DNAJC28Q9NX36 388 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 PKD2L2Q9NZM6 624 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 HACD3Q9P035 362 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
CCL28-204ENST00000514421 GOLGA4Q13439 2230 aaKnown RBP8.27□□□□□ -1.08
CCL28-204ENST00000514421 NEMP2A6NFY4 417 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 H3BM21 787 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 TNFRSF10CO14798 259 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 FLRT2O43155 660 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 CBFA2T3O75081 653 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 METTL18O95568 372 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 TNFP01375 233 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 FGF1P05230 155 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 C1SP09871 688 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 PIRTP0C851 137 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 NME1P15531 152 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 JUNDP17535 347 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 DGKAP23743 735 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 EPHA8P29322 1005 aaPredicted RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 PHBP35232 272 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ADRA1AP35348 466 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 HMGCLP35914 325 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 GPR1P46091 355 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 BLKP51451 505 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 NOVA1P51513 510 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 KIAA1024LP59773 190 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 GNGT1P63211 74 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 IL9RQ01113 521 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 PPARDQ03181 441 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 EIF2B5Q13144 721 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 TRIP6Q15654 476 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 LONRF1Q17RB8 773 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 INAVAQ3KP66 663 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ZNF542PQ5EBM4 170 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 SIRPB2Q5JXA9 342 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 FAXCQ5TGI0 409 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ENPP7Q6UWV6 458 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 MACC1Q6ZN28 852 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 RFLNAQ6ZTI6 216 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ZNF534Q76KX8 674 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 LYSMD3Q7Z3D4 306 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 GATAD2AQ86YP4 633 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 NAXDQ8IW45 347 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 ZBED8Q8IZ13 594 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
CCL28-204ENST00000514421 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 PYROXD1Q8WU10 500 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 SCAMP4Q969E2 229 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 MARVELD3Q96A59 401 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.09
CCL28-204ENST00000514421 ZBTB9Q96C00 473 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 EID2BQ96D98 161 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 WDR92Q96MX6 357 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 CDC6Q99741 560 aa8.27□□□□□ -1.09
CCL28-204ENST00000514421 GORASP1Q9BQQ3 440 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms