RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 LDB2O43679 373 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 TCEA3O75764 348 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 STK10O94804 968 aaKnown RBP9.61□□□□□ -0.87
RNF4-221ENST00000513643 SUN1O94901 812 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 AP2A1O95782 977 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 JUPP14923 745 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
RNF4-221ENST00000513643 AK4P27144 223 aaPredicted RBP9.61□□□□□ -0.87
RNF4-221ENST00000513643 PDX1P52945 283 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 B4GALNT1Q00973 533 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 ILF3Q12906 894 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNF4-221ENST00000513643 C14orf28Q4W4Y0 310 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 RASGEF1CQ8N431 466 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 SFRP1Q8N474 314 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 GLIS1Q8NBF1 620 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 WDR48Q8TAF3 677 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 ALS2CR12Q96Q35 445 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 TBL1YQ9BQ87 522 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 CCDC3Q9BQI4 270 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 FICDQ9BVA6 458 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 SPATA16Q9BXB7 569 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 FSD1LQ9BXM9 530 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 BPIFA1Q9NP55 256 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 CLCA2Q9UQC9 943 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 JRKLQ9Y4A0 524 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 AHCTF1Q8WYP5 2266 aa9.61□□□□□ -0.87
RNF4-221ENST00000513643 UNC13CQ8NB66 2214 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GOLGA6CA6NDK9 693 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GOLGA6BA6NDN3 693 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 MROH6A6NGR9 719 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ERI2A8K979 691 aaKnown RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 H7C0S8 307 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PSMD3O43242 534 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GRID2O43424 1007 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 B4GAT1O43505 415 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 VEGFDO43915 354 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 SLC25A14O95258 325 aaPredicted RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 EML2O95834 649 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GOLGA6DP0CG33 693 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 LPOP22079 712 aaPredicted RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 SPAM1P38567 509 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 FASLGP48023 281 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ZNF140P52738 457 aaPredicted RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 ZFP36L1Q07352 338 aaKnown RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 SEMA5AQ13591 1074 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PRPSAP1Q14558 356 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PTPRCAPQ14761 206 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 CHRNA6Q15825 494 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ISXQ2M1V0 245 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 CCDC157Q569K6 752 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ZNF569Q5MCW4 686 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 SEL1L2Q5TEA6 688 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ALS2CLQ60I27 953 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 IYDQ6PHW0 289 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 DOK6Q6PKX4 331 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 IGF2-ASQ6U949 168 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 XKR5Q6UX68 686 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GLT6D1Q7Z4J2 308 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PROSER1Q86XN7 944 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GALNT13Q8IUC8 556 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ARL14Q8N4G2 192 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PRELID2Q8N945 189 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 DDHD1Q8NEL9 900 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 MAPK15Q8TD08 544 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 BLOC1S5Q8TDH9 187 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ZDHHC1Q8WTX9 485 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 C1orf54Q8WWF1 131 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 PRR11Q96HE9 360 aaPredicted RBP9.6□□□□□ -0.87
RNF4-221ENST00000513643 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 LRRC40Q9H9A6 602 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GOLGA6AQ9NYA3 693 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 GULP1Q9UBP9 304 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 SLC23A2Q9UGH3 650 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 DOLKQ9UPQ8 538 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 KCTD3Q9Y597 815 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 ARL5AQ9Y689 179 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 RNF215Q9Y6U7 377 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 SCN8AQ9UQD0 1980 aa9.6□□□□□ -0.87
RNF4-221ENST00000513643 LOC400499M0QZD8 3231 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 TRBV5-4A0A0C4DH59 114 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 C2orf81A6NN90 581 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 PPM1DO15297 605 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 BUD23O43709 281 aaKnown RBP9.59□□□□□ -0.87
RNF4-221ENST00000513643 SGTAO43765 313 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 NRDCO43847 1150 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A9O60656 530 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 USP12O75317 370 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 ECEL1O95672 775 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 FGGP02679 453 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 ETS1P14921 441 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A6P19224 532 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A1P22309 533 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A4P22310 534 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A3P35503 534 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 UGT1A5P35504 534 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 GPR3P46089 330 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 CCL7P80098 99 aa9.59□□□□□ -0.87
RNF4-221ENST00000513643 TMEM115Q12893 351 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms