RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PTERQ96BW5 349 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 KLHL29Q96CT2 875 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 SLC7A6OSQ96CW6 309 aaPredicted RBP8.31□□□□□ -1.08
RNF4-220ENST00000513578 PTCD3Q96EY7 689 aaKnown RBP8.31□□□□□ -1.08
RNF4-220ENST00000513578 GPR21Q99679 349 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 CCDC106Q9BWC9 280 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 POMKQ9H5K3 350 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 NSUN3Q9H649 340 aaKnown RBP8.31□□□□□ -1.08
RNF4-220ENST00000513578 ASB8Q9H765 288 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 SLC28A3Q9HAS3 691 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 BPIFA1Q9NP55 256 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 MRGBPQ9NV56 204 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 SMOXQ9NWM0 555 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 ELOVL2Q9NXB9 296 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 LMCD1Q9NZU5 365 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 TRMT6Q9UJA5 497 aaKnown RBP8.31□□□□□ -1.08
RNF4-220ENST00000513578 GNPTGQ9UJJ9 305 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 CDH7Q9ULB5 785 aa8.31□□□□□ -1.08
RNF4-220ENST00000513578 TCF20Q9UGU0 1960 aaKnown RBP8.31□□□□□ -1.08
RNF4-220ENST00000513578 TRPC5OSA6NMA1 111 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 HEPACAM2A8MVW5 462 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 UPK3BL1B0FP48 263 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 UPK3BL2E5RIL1 263 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PSMD11O00231 422 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 GRID2O43424 1007 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZBTB14O43829 449 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 TSPAN12O95859 305 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 SLC4A1P02730 911 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 UGT2B4P06133 528 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CHRNGP07510 517 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 FGF4P08620 206 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 C1SP09871 688 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 KITP10721 976 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CHRM1P11229 460 aaPredicted RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 TIMP2P16035 220 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 AOC1P19801 751 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 KCNA5P22460 613 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 LHCGRP22888 699 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PRDX6P30041 224 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 BMP8BP34820 402 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 VIPR2P41587 438 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 KCNC1P48547 511 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 SPINT3P49223 89 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CLCN7P51798 805 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 INHBCP55103 352 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 IL2P60568 153 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ST8SIA6P61647 398 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 HERVK_113P63132 956 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PTSQ03393 145 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 RIPK1Q13546 671 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PTPRRQ15256 657 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 E2F5Q15329 346 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZNF805Q5CZA5 627 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CFAP157Q5JU67 520 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZNF678Q5SXM1 525 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 RARS2Q5T160 578 aaKnown RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 LRRC66Q68CR7 880 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 SYCE2Q6PIF2 218 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 TXNDC11Q6PKC3 985 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 FRMD7Q6ZUT3 714 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 Q6ZVU0 165 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 DPPA4Q7L190 304 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 TAS2R42Q7RTR8 314 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 RAB44Q7Z6P3 723 aaPredicted RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 PIM3Q86V86 326 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 SPATA6LQ8N4H0 392 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 AFAP1L2Q8N4X5 818 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 NAT16Q8N8M0 369 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PNPLA1Q8N8W4 532 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CHST14Q8NCH0 376 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 TMIEQ8NEW7 156 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CD200R1Q8TD46 325 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 GDPD5Q8WTR4 605 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 MAELQ96JY0 434 aaKnown RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 KLHL32Q96NJ5 620 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 RAB3IPQ96QF0 476 aaPredicted RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 EBF4Q9BQW3 602 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ERVK-6Q9BXR3 956 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 NMUR2Q9GZQ4 415 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 CLPBQ9H078 707 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 GSTO2Q9H4Y5 243 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZDHHC6Q9H6R6 413 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ALG9Q9H6U8 611 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 COG4Q9H9E3 785 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 ZDHHC3Q9NYG2 299 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 PKD2L2Q9NZM6 624 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 DEC1Q9P2X7 70 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 MARCOQ9UEW3 520 aaPredicted RBP8.3□□□□□ -1.08
RNF4-220ENST00000513578 IL36AQ9UHA7 158 aa8.3□□□□□ -1.08
RNF4-220ENST00000513578 LAMA3Q16787 3333 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 CKAP5Q14008 2032 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 EDDM13A0A1B0GTR0 161 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 EPOPA6NHQ4 379 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 TTC34A8MYJ7 566 aa8.29□□□□□ -1.08
RNF4-220ENST00000513578 H0YHG0 523 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms