RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TPST1O60507 370 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM20BO75063 409 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PIGRP01833 764 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 GALTP07902 379 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TPSB2P20231 275 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FGFR3P22607 806 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SERPINB1P30740 379 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPL22P35268 128 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 GRIA2P42262 883 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CDC42P60953 191 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FMO1Q01740 532 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPL6Q02878 288 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 TOP3AQ13472 1001 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 TPSAB1Q15661 275 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MEA1Q16626 185 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ARHGAP40Q5TG30 622 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PIK3R6Q5UE93 754 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MLIPQ5VWP3 458 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ERICH5Q6P6B1 374 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZCCHC12Q6PEW1 402 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM92BQ6ZTR7 304 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 KIAA0408Q6ZU52 694 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 XYLT1Q86Y38 959 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DEPDC4Q8N2C3 294 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC43A3Q8NBI5 491 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC4A11Q8NBS3 891 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NEK7Q8TDX7 302 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 HLA-CQ95604 372 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MSANTD3Q96H12 275 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DNAJC18Q9H819 358 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZDHHC7Q9NXF8 308 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CNTN3Q9P232 1028 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FCF1Q9Y324 198 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 CLCA3PQ9Y6N3 262 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PPLO60437 1756 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 hCG_1818297A0A087WSY0 165 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 A0A0J9YVX5 310 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM86C2PA6NEL3 165 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PIGNO95427 931 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DRD1P21728 446 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 BGNP21810 368 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 HCAR3P49019 387 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MYBPC1Q00872 1141 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC10A6Q3KNW5 377 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TPRG1Q6ZUI0 275 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PIK3C3Q8NEB9 887 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FBXO25Q8TCJ0 367 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RASSF5Q8WWW0 418 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 HMCESQ96FZ2 354 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 AP4S1Q9Y587 144 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 BACE2Q9Y5Z0 518 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SALL3Q9BXA9 1300 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 UPK3BL1B0FP48 263 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 UPK3BL2E5RIL1 263 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 AGPSO00116 658 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 STK16O75716 305 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PRAMEF1O95521 474 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 AGR2O95994 175 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 IGHEP01854 428 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PRG2P13727 222 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPL26P61254 145 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 C2orf80Q0P641 193 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TBX2Q13207 712 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 ITIH4Q14624 930 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 LPIN1Q14693 890 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CPTPQ5TA50 214 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 MAMDC4Q6UXC1 1216 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 LINGO4Q6UY18 593 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CDYL2Q8N8U2 506 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 EIF1ADQ8N9N8 165 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 MTERF3Q96E29 417 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SEC16BQ96JE7 1060 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CCT8L2Q96SF2 557 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NTPCRQ9BSD7 190 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 GBA3Q9H227 469 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ELL3Q9HB65 397 aaPredicted RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 NINJ2Q9NZG7 142 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 EDARQ9UNE0 448 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 RPL26L1Q9UNX3 145 aaKnown RBP4.22□□□□□ -1.73
VCAN-209ENST00000513016 SORCS3Q9UPU3 1222 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 PCDHGA11Q9Y5H2 935 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 DUSP10Q9Y6W6 482 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM25AB3EWG3 89 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM25CB3EWG5 89 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 FAM25GB3EWG6 89 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 LEFTY2O00292 366 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 APBB3O95704 486 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 TSPAN19P0C672 248 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC6A2P23975 617 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 IL5RAQ01344 420 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 SLC13A2Q13183 592 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CAMK1Q14012 370 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 GRM2Q14416 872 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 CPSF6Q16630 551 aaKnown RBP eCLIP4.22□□□□□ -1.73
VCAN-209ENST00000513016 SCIMPQ6UWF3 145 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 NPNTQ6UXI9 565 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ZNF783Q6ZMS7 281 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ATG14Q6ZNE5 492 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 JAZF1Q86VZ6 243 aa4.22□□□□□ -1.73
VCAN-209ENST00000513016 ARMC8Q8IUR7 673 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms