RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 FAM228AQ86W67 206 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM114A1Q8IWE2 563 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 YAF2Q8IY57 180 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 RNF214Q8ND24 703 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SETD9Q8NE22 299 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC9A6Q92581 669 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAP7D2Q96T17 732 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PARD6GQ9BYG4 376 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 NUAK2Q9H093 628 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 AZI2Q9H6S1 392 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 UNKLQ9H9P5 680 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 HEY2Q9UBP5 337 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 GGA2Q9UJY4 613 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 AKAP12Q02952 1782 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PLEKHG2Q9H7P9 1386 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ITSN1Q15811 1721 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 KIF20BQ96Q89 1820 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 EDC4Q6P2E9 1401 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 TEX13CA0A0J9YWL9 993 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ANKDD1BA6NHY2 528 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 IQCF5A8MTL0 148 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 RNF223E7ERA6 249 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 NDUFAB1O14561 156 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADAM12O43184 909 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRICKLE3O43900 615 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 B4GALT2O60909 372 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 FKTNO75072 461 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MED24O75448 989 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADAMTS2O95450 1211 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 RPLP2P05387 115 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRDX6P30041 224 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CCND2P30279 289 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADCY8P40145 1251 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ENTPD1P49961 510 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAP3K7CLP57077 242 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 WDR4P57081 412 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PCOLCEQ15113 449 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CEP78Q5JTW2 689 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLFN12LQ6IEE8 588 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 TRIM65Q6PJ69 517 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF596Q8TC21 504 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 DDX54Q8TDD1 881 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC35B4Q969S0 331 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 MYRFLQ96LU7 910 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF583Q96ND8 569 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC25A32Q9H2D1 315 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 RAB9BQ9NP90 201 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM120CQ9NX05 1096 aaKnown RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 WWOXQ9NZC7 414 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PDP1Q9P0J1 537 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 KCMF1Q9P0J7 381 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC45A2Q9UMX9 530 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 CFL2Q9Y281 166 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PPIL1Q9Y3C6 166 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 PCDHGB1Q9Y5G3 927 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 SBNO1A3KN83 1393 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 NALCNQ8IZF0 1738 aa6.26□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZBED9Q6R2W3 1325 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 FMN2Q9NZ56 1722 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ARHGEF35A5YM69 484 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MBD3L4A6NDZ8 208 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MBD3L3A6NE82 208 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 HELTA6NFD8 242 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 E9PI62 339 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SULT1B1O43704 296 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 OPHN1O60890 802 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PGLSO95336 258 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RETP07949 1114 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RHOP08100 348 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 KRT3P12035 628 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TIMP2P16035 220 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PCMT1P22061 227 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ACP1P24666 158 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RPS5P46782 204 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CAMPP49913 170 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SNU13P55769 128 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 TNP2Q05952 138 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 RASGEF1BQ0VAM2 473 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYLC2Q14093 348 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 PCSK7Q16549 785 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 LRRC23Q53EV4 343 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CLVS2Q5SYC1 327 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CASC4Q6P4E1 433 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC27A1Q6PCB7 646 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 FBXO46Q6PJ61 603 aaPredicted RBP6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 SPRED1Q7Z699 444 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF280BQ86YH2 543 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 ARFGAP2Q8N6H7 521 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM86B1Q8N7N1 296 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 REPS2Q8NFH8 660 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 CALML6Q8TD86 181 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 OR1E3Q8WZA6 343 aa6.25□□□□□ -1.41
TRAPPC11-209ENST00000512476 MIB2Q96AX9 1013 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms