RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PDE4DIPQ5VU43 2346 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 ZNF106Q9H2Y7 1883 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 FAM95CA0A1B0GW59 222 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 C16orf96A6NNT2 1141 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 C2CD4DB7Z1M9 353 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SPECC1L-ADORA2AF8WAN1 911 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 TPP1O14773 563 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 AP1G1O43747 822 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 RNASEH1O60930 286 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SNUPNO95149 360 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 IL1BP01584 269 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 TARSP26639 723 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 GABRB3P28472 473 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 PMLP29590 882 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SLC8A1P32418 973 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 KIR2DL1P43626 348 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 PRKAA2P54646 552 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 RAB10P61026 200 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 GNGT1P63211 74 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 MRPS21P82921 87 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 CREB5Q02930 508 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 ZBTB16Q05516 673 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 NFATC2Q13469 925 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 CCINQ13939 588 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 PDE1CQ14123 709 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 ARHGEF7Q14155 803 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 USP10Q14694 798 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 TMEM196Q5HYL7 178 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 HHATQ5VTY9 493 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 CRTC1Q6UUV9 634 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SNX20Q7Z614 316 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 ZSWIM9Q86XI8 627 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 DENND6AQ8IWF6 608 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 C4orf33Q8N1A6 199 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 DYDC1Q8WWB3 177 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 SORCS1Q8WY21 1168 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 LPGAT1Q92604 370 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 KCNJ9Q92806 393 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 FAM131CQ96AQ9 280 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 MRRFQ96E11 262 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 KLHL32Q96NJ5 620 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 GABRG3Q99928 467 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 EPN3Q9H201 632 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 DYRK4Q9NR20 520 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 KLHL42Q9P2K6 505 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
NR1I3-230ENST00000511944 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 TNRC18O15417 2968 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-230ENST00000511944 LAMA3Q16787 3333 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 IGLV3-16A0A075B6K0 115 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 A0A096LPK6 155 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 GLYATL1P3A0A0U1RQE8 302 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 H3BQ06 376 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 EIF3FO00303 357 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 QSOX1O00391 747 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SOX1O00570 391 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 AURKAO14965 403 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 AREL1O15033 823 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 H2AFYO75367 372 aaKnown RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 NDUFS3O75489 264 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PIAS1O75925 651 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SRP72O76094 671 aaKnown RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 FAM107AO95990 144 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PRKCGP05129 697 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PYGLP06737 847 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 CTSLP07711 333 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 ALPIP09923 528 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PIRTP0C851 137 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SRFP11831 508 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 CREB1P16220 341 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 ZNF7P17097 686 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 BPIP17213 487 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 KCNA5P22460 613 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 XPAP23025 273 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 NTSR1P30989 418 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 MC4RP32245 332 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 RPA3P35244 121 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SPINT3P49223 89 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 GRSF1Q12849 480 aaKnown RBP eCLIP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 CTBP1Q13363 440 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PEX6Q13608 980 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 BMPR2Q13873 1038 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 MPP2Q14168 576 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 LRRC66Q68CR7 880 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SDE2Q6IQ49 451 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 UGT3A1Q6NUS8 523 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PARS2Q7L3T8 475 aaKnown RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PTAR1Q7Z6K3 402 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 RBFAQ8N0V3 343 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 SLC44A3Q8N4M1 653 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 OTUD6BQ8N6M0 293 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 ZNF513Q8N8E2 541 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-230ENST00000511944 TTC8Q8TAM2 541 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
NR1I3-230ENST00000511944 TCP10LQ8TDR4 215 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms