RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CYLC2Q14093 348 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PTK2BQ14289 1009 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PTPRRQ15256 657 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 TSNQ15631 228 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CDKN3Q16667 212 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PTPRNQ16849 979 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 UGT3A2Q3SY77 523 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 FUT11Q495W5 492 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ZRANB3Q5FWF4 1079 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PITRM1Q5JRX3 1037 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 C1orf146Q5VVC0 180 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NXNQ6DKJ4 435 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 C22orf39Q6P5X5 142 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PAQR3Q6TCH7 311 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 C16orf89Q6UX73 402 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CERS6Q6ZMG9 384 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 TPGS1Q6ZTW0 290 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 SPATA31D4Q6ZUB0 917 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RPS27LQ71UM5 84 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RTL10Q7L3V2 364 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 OTOP2Q7RTS6 562 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 LYSMD3Q7Z3D4 306 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NECAB2Q7Z6G3 386 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RAB44Q7Z6P3 723 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CAMK1DQ8IU85 385 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 DEFB107AQ8IZN7 70 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PGAM4Q8N0Y7 254 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 MAB21L3Q8N8X9 362 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 SIDT2Q8NBJ9 832 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 OR2AP1Q8NGE2 309 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 OR6K2Q8NGY2 324 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CEP70Q8NHQ1 597 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RIN3Q8TB24 985 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 HMGCLL1Q8TB92 370 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 STAG3L4Q8TBR4 150 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 KCNV2Q8TDN2 545 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ZNF483Q8TF39 744 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 DDI1Q8WTU0 396 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 SLC22A17Q8WUG5 538 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 JADE3Q92613 823 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 EXT2Q93063 718 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 BHMTQ93088 406 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 FUBP1Q96AE4 644 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ISG20Q96AZ6 181 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RCN3Q96D15 328 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 EID2BQ96D98 161 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ECHDC3Q96DC8 303 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 C19orf60Q96EN9 201 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 MARK4Q96L34 752 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PPP1R36Q96LQ0 422 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ZNF570Q96NI8 536 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 MCCC1Q96RQ3 725 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 TUBGCP5Q96RT8 1024 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 LYSMD1Q96S90 227 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 GPR21Q99679 349 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 SLC30A3Q99726 388 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 TCF25Q9BQ70 676 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CORO1BQ9BR76 489 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NUSAP1Q9BXS6 441 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 EMILIN2Q9BXX0 1053 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 SLC46A2Q9BY10 475 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 GPR63Q9BZJ6 419 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 TM6SF2Q9BZW4 377 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CEP44Q9C0F1 390 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ATP13A3Q9H7F0 1226 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ABCB8Q9NUT2 735 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NMRK1Q9NWW6 199 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NDE1Q9NXR1 346 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 NUDT4Q9NZJ9 180 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 KIAA1522Q9P206 1035 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 EVLQ9UI08 416 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ANGPTL2Q9UKU9 493 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 INTS6Q9UL03 887 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 RNF112Q9ULX5 631 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 CLEC4EQ9ULY5 219 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PRPF19Q9UMS4 504 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 FAM50BQ9Y247 325 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 HS3ST2Q9Y278 367 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PKP3Q9Y446 797 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 PCDHB1Q9Y5F3 818 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 WASF2Q9Y6W5 498 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ANAPC1Q9H1A4 1944 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 OBSL1O75147 1896 aa4.73□□□□□ -1.65
PDLIM5-214ENST00000510099 ANKRD36A6QL64 1941 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 PTPRSQ13332 1948 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 A0A0U1RQS6 177 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 C1orf232A0A0U1RR37 186 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 LOC100653049A0A140TA62 436 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 LRRC14BA6NHZ5 514 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 SOBPA7XYQ1 873 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 HIDE1A8MVS5 230 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 CDC7O00311 574 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 BTN3A1O00481 513 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 AZIN1O14977 448 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 UBDO15205 165 aa4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 NVLO15381 856 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-214ENST00000510099 CCL16O15467 120 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms