RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TMEM63AO94886 807 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TJP3O95049 919 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 FGGP02679 453 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 CYP2A6P11509 494 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 MYCLP1P12525 358 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TSHRP16473 764 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TEAD1P28347 426 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 ATXN3P54252 364 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SIM1P81133 766 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DPTQ07507 201 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SGCGQ13326 291 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC14A1Q13336 389 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SNX1Q13596 522 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DEFB133Q30KQ1 61 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SEL1L2Q5TEA6 688 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 ANKRD22Q5VYY1 191 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 RAET1GQ6H3X3 334 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 PNCKQ6P2M8 343 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 GUSBP11Q6P575 273 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DARS2Q6PI48 645 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DOK6Q6PKX4 331 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 ADAMTSL4Q6UY14 1074 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 RANBP10Q6VN20 620 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 PID1Q7Z2X4 250 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 RAB44Q7Z6P3 723 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC35F3Q8IY50 421 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 OR4C6Q8NH72 309 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 PATE1Q8WXA2 126 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 AP2M1Q96CW1 435 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SCARF2Q96GP6 870 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 WDR92Q96MX6 357 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TRIM56Q9BRZ2 755 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 WDR26Q9H7D7 661 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 BPIFA1Q9NP55 256 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 APOBEC3BQ9UH17 382 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DMGDHQ9UI17 866 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 KLK13Q9UKR3 277 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC17A4Q9Y2C5 497 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 TMEM98Q9Y2Y6 226 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 ARL5AQ9Y689 179 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 AK5Q9Y6K8 562 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 A0A1W2PQ67 120 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 PRSS38A1L453 326 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 A6NCN8 305 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 AQP9O43315 295 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 LDB2O43679 373 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SGTAO43765 313 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 CEP104O60308 925 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 NOBOXO60393 691 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 MTX2O75431 263 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 HOXC4P09017 264 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 CEACAM1P13688 526 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF30P17039 623 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 AK4P27144 223 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 RPL22P35268 128 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 GRK6P43250 576 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ARSDP51689 593 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 HK3P52790 923 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 DCDC1P59894 354 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SRP54P61011 504 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 YPEL5P62699 121 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 XIAPP98170 497 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 B4GALNT1Q00973 533 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 MPP3Q13368 585 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SEMA5AQ13591 1074 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 PEX6Q13608 980 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 CYP1B1Q16678 543 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF569Q5MCW4 686 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 PERM1Q5SV97 790 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 CCDC181Q5TID7 509 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ENPP7Q6UWV6 458 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF547Q8IVP9 402 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 OXR1Q8N573 874 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 OR56A4Q8NGH8 313 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 OR13C4Q8NGS5 318 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 LMX1AQ8TE12 382 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ALS2CR12Q96Q35 445 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 OSBPL9Q96SU4 736 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 VAT1Q99536 393 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 WDR83Q9BRX9 315 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 BOCQ9BWV1 1114 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 GRIP2Q9C0E4 1043 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 TMEM168Q9H0V1 697 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SUDS3Q9H7L9 328 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 MAGEE1Q9HCI5 957 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 IL17CQ9P0M4 197 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 GULP1Q9UBP9 304 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 TRHDEQ9UKU6 1024 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SUFUQ9UMX1 484 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 SNX12Q9UMY4 172 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 PRKAB1Q9Y478 270 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 DGKBQ9Y6T7 804 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 EPG5Q9HCE0 2579 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ITPR1Q14643 2758 aa7.15□□□□□ -1.26
TOPBP1-207ENST00000509162 ADAMTS20P59510 1910 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms