RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 FUCA2Q9BTY2 467 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 TMEM168Q9H0V1 697 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 ADNPQ9H2P0 1102 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PDFQ9HBH1 243 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 FGF22Q9HCT0 170 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 NOCTQ9UK39 431 aaKnown RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 ATP8A1Q9Y2Q0 1164 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 PCDHGA3Q9Y5H0 932 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 U3KQE9 123 aa8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPTBN1Q01082 2364 aaKnown RBP8.62□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPTAN1Q13813 2472 aaKnown RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 TEX15Q9BXT5 2789 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM170AA1A519 330 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 SIGLEC16A6NMB1 481 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 STMND1H3BQB6 276 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CACNB4O00305 520 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 HGSO14964 777 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 RECQL5O94762 991 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CBX7O95931 251 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 PCCBP05166 539 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CD8BP10966 210 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 KRT3P12035 628 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 GM2AP17900 193 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 FUT4P22083 530 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 KELP23276 732 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 EPHB2P29323 1055 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 STAT1P42224 750 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 MAPK10P53779 464 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CYP4F2P78329 520 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 NSUN2Q08J23 767 aaKnown RBP eCLIP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 RALGDSQ12967 914 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 ARHGEF7Q14155 803 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 C16orf72Q14CZ0 275 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 TMEM201Q5SNT2 666 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPECC1LQ69YQ0 1117 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 LIPIQ6XZB0 460 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 REC114Q7Z4M0 266 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 PHLDB2Q86SQ0 1253 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 PIM3Q86V86 326 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 NRROSQ86YC3 692 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CAMK1DQ8IU85 385 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 FAM114A1Q8IWE2 563 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CBARPQ8N350 705 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CCL4L1Q8NHW4 92 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 SLC30A5Q8TAD4 765 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 SLC20A1Q8WUM9 679 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 NKD1Q969G9 470 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 TAAR9Q96RI9 348 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 LGR4Q9BXB1 951 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CDH19Q9H159 772 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 DPEP2Q9H4A9 486 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 LRRC19Q9H756 370 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CATSPERBQ9H7T0 1116 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 MRPL40Q9NQ50 206 aaKnown RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 CORINQ9Y5Q5 1042 aa8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 USP9XQ93008 2570 aaPredicted RBP8.61□□□□□ -1.03
COL4A3BP-206ENST00000508809 IGHV5-10-1A0A0J9YXX1 117 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TCRBV5S1A1TA0A578 114 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CLEC18AA5D8T8 446 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 J3KR12 359 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRAFD1O14545 582 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PRAMEF11O60813 436 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 FUCA1P04066 466 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 FGF1P05230 155 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 FGF3P11487 239 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CCL4P13236 92 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CCNB1P14635 433 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 GPD1P21695 349 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CD1CP29017 333 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 HTR7P34969 479 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 GPR3P46089 330 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 NDST2P52849 883 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 LIMK2P53671 638 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 AIF1P55008 147 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 JAM2P57087 298 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 OR1D5P58170 312 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 POLR2LP62875 67 aaKnown RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TLE1Q04724 770 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CAMK4Q16566 473 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TPD52L1Q16890 204 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 NKPD1Q17RQ9 610 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PHF19Q5T6S3 580 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PNCKQ6P2M8 343 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CLEC18BQ6UXF7 455 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 TRIM72Q6ZMU5 477 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 SRLQ86TD4 932 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CDH24Q86UP0 819 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 ZNF354CQ86Y25 554 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PELI3Q8N2H9 469 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 CLEC18CQ8NCF0 446 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 KIAA1524Q8TCG1 905 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 NCAPGQ9BPX3 1015 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
COL4A3BP-206ENST00000508809 GANQ9H2C0 597 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms