RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 INTS6Q9UL03 887 aaKnown RBP5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CLEC4EQ9ULY5 219 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SNX12Q9UMY4 172 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 ERVW-1Q9UQF0 538 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 SAR1BQ9Y6B6 198 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 COL4A3Q01955 1670 aa5.56□□□□□ -1.52
HMGB1P44-201ENST00000508597 CACNA1HO95180 2353 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 A0A0D9SEW6 157 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 GOLGA6L10A0A0M3HER8 536 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 A0A1W2PQ67 120 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CFAP69A5D8W1 941 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRRT4C9JH25 899 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 MCF2LO15068 1137 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 MATN3O15232 486 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ALOX15BO15296 676 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 KATNA1O75449 491 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRKD3O94806 890 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PAPSS2O95340 614 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 EGFP01133 1207 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 NTSR1P30989 418 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 HOXA6P31267 233 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CASQ1P31415 396 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 STIP1P31948 543 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PAFAH1B1P43034 410 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 GLRBP48167 497 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CSNK1DP48730 415 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 MARCKSL1P49006 195 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SERPINH1P50454 418 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PAPOLAP51003 745 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SNRPD1P62314 119 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 GBE1Q04446 702 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 KDSRQ06136 332 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 RAD51Q06609 339 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PPIDQ08752 370 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 STARD3Q14849 445 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 NOMO1Q15155 1222 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 TERF2Q15554 542 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CATSPEREQ5SY80 951 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 DCAF12L1Q5VU92 463 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 TMEM215Q68D42 235 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SERPINA13PQ6UXR4 307 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SYT13Q7L8C5 426 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 DSG4Q86SJ6 1040 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CIR1Q86X95 450 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF354CQ86Y25 554 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CCDC13Q8IYE1 715 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CHPFQ8IZ52 775 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 APCDD1Q8J025 514 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SH2D3CQ8N5H7 860 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CAMKK1Q8N5S9 505 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CNTD1Q8N815 330 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZNF610Q8N9Z0 462 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CLRN3Q8NCR9 226 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 OR7D4Q8NG98 312 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 TFB1MQ8WVM0 346 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 MAML1Q92585 1016 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 HMCESQ96FZ2 354 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 LRIG1Q96JA1 1093 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 RUNDC3BQ96NL0 473 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 OLFM3Q96PB7 478 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PPP1R2P1Q96PQ5 205 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 OSBPL9Q96SU4 736 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PSMB7Q99436 277 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 GABRG3Q99928 467 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 C1QTNF1Q9BXJ1 281 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 TRIM8Q9BZR9 551 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 CIPCQ9C0C6 399 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 TMEM245Q9H330 911 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ZMAT4Q9H898 229 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 ETNK2Q9NVF9 386 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 KLHL11Q9NVR0 708 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 UBA2Q9UBT2 640 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 FEZ2Q9UHY8 353 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 VPS51Q9UID3 782 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 MMP17Q9ULZ9 603 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 SCML1Q9UN30 329 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 NDRG2Q9UN36 371 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 PACSIN2Q9UNF0 486 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 DRG1Q9Y295 367 aaKnown RBP5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 HEY1Q9Y5J3 304 aa5.55□□□□□ -1.52
HMGB1P44-201ENST00000508597 NYNRINQ9P2P1 1898 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 EDDM13A0A1B0GTR0 161 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 BCLAF3A2AJT9 711 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 PGRMC1O00264 195 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 DFFAO00273 331 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 TRIM24O15164 1050 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 PRICKLE3O43900 615 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 MFSD11O43934 449 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 CEP104O60308 925 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 NOBOXO60393 691 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 SYNCRIPO60506 623 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 RNASEH1O60930 286 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 NEBLO76041 1014 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 GSRP00390 522 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 FGGP02679 453 aa5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 ATP1A1P05023 1023 aaKnown RBP5.54□□□□□ -1.52
HMGB1P44-201ENST00000508597 SRCP12931 536 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms