RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 MAPK10P53779 464 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 UCNP55089 124 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 DCDC1P59894 354 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SRSF6Q13247 344 aaKnown RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 LRP8Q14114 963 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SPA17Q15506 151 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 TGIF1Q15583 401 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ZNF569Q5MCW4 686 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 C11orf63Q6NUN7 778 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 KDELC1Q6UW63 502 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 DAAM2Q86T65 1068 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 CCDC170Q8IYT3 715 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SFRP1Q8N474 314 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 CCDC97Q96F63 343 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 CCDC74BQ96LY2 380 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 HERPUD2Q9BSE4 406 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 HEMGNQ9BXL5 484 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 GPR63Q9BZJ6 419 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 OR2AG1Q9H205 316 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 BPIFA1Q9NP55 256 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 FOXJ2Q9P0K8 574 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 PCDHGA7Q9Y5G6 932 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ADGRG1Q9Y653 693 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SDK2Q58EX2 2172 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 IGHV5-10-1A0A0J9YXX1 117 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ATXN7O15265 892 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 MTX2O75431 263 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SLC25A14O95258 325 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 CCL4P13236 92 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 BPIP17213 487 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 MPSTP25325 297 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 GPR3P46089 330 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 FASLGP48023 281 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 WNT3AP56704 352 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 PEX6Q13608 980 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 BZW1Q7L1Q6 419 aaKnown RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 RCOR2Q8IZ40 523 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ZNF567Q8N184 647 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 SLC39A7Q92504 469 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 OXNAD1Q96HP4 312 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 QKIQ96PU8 341 aaKnown RBP eCLIP14.13□□□□□ -0.157e-8■■■■■ 35.1
RAB28-205ENST00000508274 CMKLR1Q99788 373 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 CARD9Q9H257 536 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 KCNK4Q9NYG8 393 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 NFKBIL1Q9UBC1 381 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 REXO2Q9Y3B8 237 aaKnown RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 DUSP10Q9Y6W6 482 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 A6NCN8 305 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 EIF4E1BA6NMX2 242 aaKnown RBP14.12□□□□□ -0.15
RAB28-205ENST00000508274 C9orf172C9J069 976 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 GRID2O43424 1007 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 NUAK1O60285 661 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 SNX2O60749 519 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 NDUFA10O95299 355 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 FECHP22830 423 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 HHEXQ03014 270 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 VAC14Q08AM6 782 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 PLA2G4EQ3MJ16 856 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 KHDC1Q4VXA5 237 aaKnown RBP14.12□□□□□ -0.15
RAB28-205ENST00000508274 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.12□□□□□ -0.15
RAB28-205ENST00000508274 CRTC3Q6UUV7 619 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 ADGRG6Q86SQ4 1221 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 SLC25A41Q8N5S1 370 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 TRAM1L1Q8N609 369 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 USP7Q93009 1102 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 GLYATL1Q969I3 302 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 MRFAP1L1Q96HT8 127 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 PANX2Q96RD6 677 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 ZSCAN5AQ9BUG6 496 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 RMI1Q9H9A7 625 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 TMPRSS11EQ9UL52 423 aa14.12□□□□□ -0.15
RAB28-205ENST00000508274 LOC285095A0A1B0GVY8 99 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 NVLO15381 856 aaKnown RBP14.11□□□□□ -0.15
RAB28-205ENST00000508274 C1QL1O75973 258 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 LIMK2P53671 638 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 NFATC2Q13469 925 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 SIRPB2Q5JXA9 342 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 KIAA1614Q5VZ46 1190 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 PID1Q7Z2X4 250 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 ZFAND4Q86XD8 727 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 ACRBPQ8NEB7 543 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 HTR3CQ8WXA8 447 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 PMEPA1Q969W9 287 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 TMEM159Q96B96 161 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 RBM41Q96IZ5 413 aaKnown RBP14.11□□□□□ -0.15
RAB28-205ENST00000508274 MRGPRX2Q96LB1 330 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 TRIM39Q9HCM9 518 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 SLC23A2Q9UGH3 650 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 ACSL6Q9UKU0 697 aa14.11□□□□□ -0.15
RAB28-205ENST00000508274 EPN1Q9Y6I3 576 aaPredicted RBP14.11□□□□□ -0.15
RAB28-205ENST00000508274 ZNF106Q9H2Y7 1883 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms