RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TUBGCP3Q96CW5 907 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMARCD1Q96GM5 515 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLT1D1Q96MS3 346 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PPP1R10Q96QC0 940 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SH3GL1Q99961 368 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PSD2Q9BQI7 771 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MTG1Q9BT17 334 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 OSBPL10Q9BXB5 764 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 LRRC3Q9BY71 257 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MROQ9BYG7 248 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ULBP1Q9BZM6 244 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TKTL2Q9H0I9 626 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC25A51Q9H1U9 297 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MFSD1Q9H3U5 465 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TFB2MQ9H5Q4 396 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 EPS8L2Q9H6S3 715 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 AKTIPQ9H8T0 292 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 SYTL2Q9HCH5 934 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYP4F12Q9HCS2 524 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 MID1IP1Q9NPA3 183 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 COMMD8Q9NX08 183 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIM2Q9P1W9 311 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 WARS2Q9UGM6 360 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 RIMKLBQ9ULI2 386 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 TDRKHQ9Y2W6 561 aaKnown RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCDHA9Q9Y5H5 950 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 ORC6Q9Y5N6 252 aa4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPC6Q9Y625 555 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P16-201ENST00000508037 COL4A5P29400 1685 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A0G2JLL6 359 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 C1orf232A0A0U1RR37 186 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A1B0GTW7 788 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SMIM35A0A1B0GVV1 85 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TCRBV5S2A0A599 114 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RBM47A0AV96 593 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ISPDA4D126 451 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TRIM43BA6NCK2 446 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM247A6NEH6 219 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CCDC154A6NI56 674 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM72CH0Y354 149 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 H3BRB1 525 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FXYD1O00168 92 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DLGAP1O14490 977 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CITO14578 2027 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 STX16O14662 325 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIP5K1BO14986 540 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DYNC1LI2O43237 492 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 KDM1AO60341 852 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MGEA5O60502 916 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 TPST1O60507 370 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SNX2O60749 519 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PMPCBO75439 489 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC22A3O75751 556 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SOAT2O75908 522 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLP2RO95838 553 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYBBP04839 570 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ALDH2P05091 517 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PGK2P07205 417 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANXA6P08133 673 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GNAO1P09471 354 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 UROSP10746 265 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 SLC2A3P11169 496 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 HGFP14210 728 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DARSP14868 501 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 CD1EP15812 388 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ITIH1P19827 911 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 OGNP20774 298 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FDXRP22570 491 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 YWHAQP27348 245 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARNTP27540 789 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 HOXA11P31270 313 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 HOXC13P31276 330 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 EPHX2P34913 555 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 HALP42357 657 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GSK3BP49841 420 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 POLR2JP52435 117 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARSFP54793 590 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAP3K7CLP57077 242 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 LILRA4P59901 499 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ERVK-8P63133 956 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 NRG1Q02297 640 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MVKQ03426 396 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 EMX2Q04743 252 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAD51Q06609 339 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 BNIP3Q12983 259 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 LCP2Q13094 533 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ITGADQ13349 1161 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 BTG3Q14201 252 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 RCAN2Q14206 197 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 GAS6Q14393 721 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF460Q14592 562 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 ACOX1Q15067 660 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 OXA1LQ15070 435 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 FXNQ16595 210 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 PPP1R3AQ16821 1122 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 UGT3A2Q3SY77 523 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 UNC50Q53HI1 259 aa4.93□□□□□ -1.62
HMGB3P16-201ENST00000508037 DALRD3Q5D0E6 543 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms