RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 KRT3P12035 628 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 F3P13726 295 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 AMD1P17707 334 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 GPD1P21695 349 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 PTGIRP43119 386 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 RENBPP51606 427 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 TPI1P60174 286 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 KIR2DS5Q14953 304 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 TCP11X2Q5H9J9 407 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
DDR1-260ENST00000507533 AVL9Q8NBF6 648 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 FDCSPQ8NFU4 85 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 COX14Q96I36 57 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 RANBP9Q96S59 729 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 AGAP2Q99490 1192 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 C11orf70Q9BRQ4 267 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
DDR1-260ENST00000507533 ITPR3Q14573 2671 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 CELSR1Q9NYQ6 3014 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 OR5K4A6NMS3 321 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 SMTNL1A8MU46 457 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 DFFAO00273 331 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 ZNF185O15231 689 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.21
DDR1-260ENST00000507533 DNAJC6O75061 913 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 UBXN7O94888 489 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 ACP5P13686 325 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
DDR1-260ENST00000507533 ZNF165P49910 485 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 ITGA1P56199 1179 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 IL10RBQ08334 325 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.21
DDR1-260ENST00000507533 VWA3BQ502W6 1294 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 SP5Q6BEB4 398 aaPredicted RBP13.71□□□□□ -0.21
DDR1-260ENST00000507533 DPY19L2P1Q6NXN4 242 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 WDR59Q6PJI9 974 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 ARHGAP36Q6ZRI8 547 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 MCEMP1Q8IX19 187 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 EPS8L1Q8TE68 723 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 SCRN2Q96FV2 425 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 NDST4Q9H3R1 872 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 UCK1Q9HA47 277 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 FARSAQ9Y285 508 aaKnown RBP13.71□□□□□ -0.21
DDR1-260ENST00000507533 FHOD1Q9Y613 1164 aa13.71□□□□□ -0.21
DDR1-260ENST00000507533 PDZD2O15018 2839 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 NF1P21359 2839 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 F8P00451 2351 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 A6NL46 340 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 CCP110O43303 1012 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 CYP1A1P04798 512 aaPredicted RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 PYGLP06737 847 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 CTPS1P17812 591 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 HTR7P34969 479 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 AIF1P55008 147 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 CDK18Q07002 472 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 LBRQ14739 615 aaKnown RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 PWWP2BQ6NUJ5 590 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 TMEM26Q6ZUK4 368 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 USP45Q70EL2 814 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 PRSS42Q7Z5A4 293 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 NLRP8Q86W28 1048 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 ARHGAP12Q8IWW6 846 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 SLC20A1Q8WUM9 679 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 KLHL6Q8WZ60 621 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 PLEKHG4BQ96PX9 1271 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 MCCC1Q96RQ3 725 aaPredicted RBP13.7□□□□□ -0.22
DDR1-260ENST00000507533 SELENOOQ9BVL4 669 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 TAB2Q9NYJ8 693 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 RARRES3Q9UL19 164 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 SLC30A1Q9Y6M5 507 aa13.7□□□□□ -0.22
DDR1-260ENST00000507533 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 NELFEP18615 380 aaKnown RBP13.69□□□□□ -0.22
DDR1-260ENST00000507533 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
DDR1-260ENST00000507533 PDE1BQ01064 536 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 SLC10A7Q0GE19 358 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 TRAF2Q12933 501 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 IQCB1Q15051 598 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 KRT31Q15323 416 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 KRTAP21-3Q3LHN1 58 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 TMCO4Q5TGY1 634 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 LRRC66Q68CR7 880 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 FAM92BQ6ZTR7 304 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 ZNF765Q7L2R6 523 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms