RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 IGHV5-51A0A0C4DH38 117 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CXorf51AA0A1B0GTR3 108 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 TSPAN11A1L157 253 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 MEN1O00255 615 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 PCDH17O14917 1159 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 MED7O43513 233 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 KLRC4O43908 158 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 RAMP2O60895 175 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 UNC5CO95185 931 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 VIPP01282 170 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 EPB41P11171 864 aaKnown RBP7.1□□□□□ -1.27
VCAN-207ENST00000507162 KRT5P13647 590 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 SLC2A4P14672 509 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 AGAP20933 346 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 SCNN1AP37088 669 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CA7P43166 264 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 GPR1P46091 355 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 GSDMDP57764 484 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 ACY1Q03154 408 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 ENPEPQ07075 957 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 PDCLQ13371 301 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 GRM3Q14832 879 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CYTH1Q15438 398 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 PLEKHS1Q5SXH7 462 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 AFMIDQ63HM1 303 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CERS6Q6ZMG9 384 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 DPPA4Q7L190 304 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 RRAGAQ7L523 313 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 PRSS42Q7Z5A4 293 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 BPHLQ86WA6 291 aaPredicted RBP7.1□□□□□ -1.27
VCAN-207ENST00000507162 DNAAF5Q86Y56 855 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 TRIM48Q8IWZ4 208 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 LZTR1Q8N653 840 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CATSPER1Q8NEC5 780 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 OR1N1Q8NGS0 311 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 PPP4R1Q8TF05 950 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 SHC3Q92529 594 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 CLIP3Q96DZ5 547 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 COQ10AQ96MF6 247 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 NT5C1BQ96P26 610 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 AGAP3Q96P47 875 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 KLC2Q9H0B6 622 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 ENKD1Q9H0I2 346 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 ATP13A2Q9NQ11 1180 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 KCND1Q9NSA2 647 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 ASNSD1Q9NWL6 643 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.1□□□□□ -1.27
VCAN-207ENST00000507162 INTS1Q8N201 2190 aaKnown RBP7.1□□□□□ -1.27
VCAN-207ENST00000507162 HIVEP2P31629 2446 aa7.1□□□□□ -1.27
VCAN-207ENST00000507162 KIR2DS5A0A0G2JLQ3 304 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 A0A0G2JNG1 304 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 LILRA5A6NI73 299 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 KIR2DS3K7RE56 304 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 GPR37O15354 613 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 DDX3YO15523 660 aaKnown RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 IGHEP01854 428 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ACP5P13686 325 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ETV3P41162 512 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 POLR2LP62875 67 aaKnown RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 ADAM8P78325 824 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 SLC6A3Q01959 620 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 FOLH1Q04609 750 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 RBPJQ06330 500 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 LRP8Q14114 963 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 DSG2Q14126 1118 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 KIR2DS5Q14953 304 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 STK38Q15208 465 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 TLR1Q15399 786 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 GPR19Q15760 415 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 INO80DQ53TQ3 878 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ACBD5Q5T8D3 534 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 OTUD1Q5VV17 481 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 MLIPQ5VWP3 458 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 TMEM26Q6ZUK4 368 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 C11orf57Q6ZUT1 292 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 Q6ZVL8 140 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 FAM183BPQ6ZVS7 135 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 MRGPREQ86SM8 312 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 COG1Q8WTW3 980 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ZNF606Q8WXB4 792 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 CASKIN2Q8WXE0 1202 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 RSC1A1Q92681 617 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 NINJ1Q92982 152 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ARSGQ96EG1 525 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 ZNF514Q96K75 400 aaPredicted RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 PLEKHG4BQ96PX9 1271 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 USP28Q96RU2 1077 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 CPXM1Q96SM3 734 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 TBCBQ99426 244 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 NPY6RQ99463 290 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 ZNF559Q9BR84 538 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 HERPUD2Q9BSE4 406 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 GTPBP4Q9BZE4 634 aaKnown RBP7.09□□□□□ -1.27
VCAN-207ENST00000507162 SYNCQ9H7C4 482 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 MAGEF1Q9HAY2 307 aa7.09□□□□□ -1.27
VCAN-207ENST00000507162 GPAMQ9HCL2 828 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms