RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 NUAK1O60285 661 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 FYNP06241 537 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 ADRA1AP35348 466 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 DIO3P55073 304 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 CD47Q08722 323 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 TOP3AQ13472 1001 aaPredicted RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 TMEM207Q6UWW9 146 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 TEX37Q96LM6 180 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 NSMCE2Q96MF7 247 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 FCRL5Q96RD9 977 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 MID1IP1Q9NPA3 183 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 PAK1IP1Q9NWT1 392 aaPredicted RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 SLAMF8Q9P0V8 285 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 FBXW11Q9UKB1 542 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 PCDHGB1Q9Y5G3 927 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 M0R3G1 203 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 RGS13O14921 159 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 AGXTP21549 392 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 ACVR2AP27037 513 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 PIGAP37287 484 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 SERPINB10P48595 397 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 MRPL19P49406 292 aaKnown RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 SLC26A2P50443 739 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 KCNK10P57789 538 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 OR4D2P58180 307 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 ZBTB6Q15916 424 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 CELF3Q5SZQ8 465 aaKnown RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 HECTD2Q5U5R9 776 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 RBM23Q86U06 439 aaKnown RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 LACC1Q8IV20 430 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 PJA1Q8NG27 643 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 OR13J1Q8NGT2 312 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 FAR1Q8WVX9 515 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 NDEL1Q9GZM8 345 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 MOV10Q9HCE1 1003 aaKnown RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 DERAQ9Y315 318 aa17■□□□□ 0.31
SQSTM1-211ENST00000506690 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
SQSTM1-211ENST00000506690 SLC1A7O00341 560 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 TSPAN1O60635 241 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 CAPN15O75808 1086 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ANXA9O76027 345 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 CHRNA1P02708 482 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 RAP2AP10114 183 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 SERPINB1P30740 379 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 SLC26A3P40879 764 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 NEK2P51955 445 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 EMX2Q04743 252 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 EPS8Q12929 822 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 CAMK2BQ13554 666 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 GLYATQ6IB77 296 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 DNAJC14Q6Y2X3 702 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 AKAP14Q86UN6 197 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ZDHHC13Q8IUH4 622 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 DYNC2LI1Q8TCX1 351 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ZNF419Q96HQ0 510 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ALOXE3Q9BYJ1 711 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 TTC34A8MYJ7 566 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 PSMD11O00231 422 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 NDUFB5O43674 189 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 SOAT2O75908 522 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ENO2P09104 434 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ISL1P61371 349 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ZNF33AQ06730 810 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 GRIK2Q13002 908 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 GPR158Q5T848 1215 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 BEND5Q7L4P6 421 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 TMEM199Q8N511 208 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 ISG20Q96AZ6 181 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 PTERQ96BW5 349 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 CELF6Q96J87 481 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 KCNA7Q96RP8 456 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 OSBPL10Q9BXB5 764 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 LRRC3Q9BY71 257 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 DUSP16Q9BY84 665 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 PARVBQ9HBI1 364 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 POLR3BQ9NW08 1133 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 MAGEL2Q9UJ55 1249 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 RALGAPA2Q2PPJ7 1873 aa16.99■□□□□ 0.31
SQSTM1-211ENST00000506690 G3V2T6 193 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 C1RP00736 705 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 LINC00032P0C843 101 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 CD40LGP29965 261 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 PPP5CP53041 499 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 TPD52P55327 224 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 PPP2R2BQ00005 443 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 EMX1Q04741 257 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 MAPK11Q15759 364 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 ZNF555Q8NEP9 628 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 NLGN2Q8NFZ4 835 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 C18orf25Q96B23 403 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 PRKD2Q9BZL6 878 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 PLEKHA5Q9HAU0 1116 aa16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 INTS7Q9NVH2 962 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 LEF1Q9UJU2 399 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-211ENST00000506690 ZNF229Q9UJW7 825 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms