RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TNPO3Q9Y5L0 923 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 COPG1Q9Y678 874 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-204ENST00000505676 MTCL1Q9Y4B5 1905 aaKnown RBP17.14■□□□□ 0.34
TRAPPC11-204ENST00000505676 PRAMEF1O95521 474 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 PABPC1P11940 636 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 POLR2LP62875 67 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 TBL3Q12788 808 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 NFATC2Q13469 925 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 RCN1Q15293 331 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDKN3Q16667 212 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 KANK2Q63ZY3 851 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 METTL2BQ6P1Q9 378 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 ADGRG6Q86SQ4 1221 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 MYLK4Q86YV6 388 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 DEFB107AQ8IZN7 70 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 FBXW8Q8N3Y1 598 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 SLC22A17Q8WUG5 538 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 WDR60Q8WVS4 1066 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 ULK4Q96C45 1275 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 C19orf60Q96EN9 201 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 SCRN2Q96FV2 425 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 RSRC1Q96IZ7 334 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 CATSPER2Q96P56 530 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 MCCC1Q96RQ3 725 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 HTATIP2Q9BUP3 242 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 SHCBP1LQ9BZQ2 653 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 BPIFA1Q9NP55 256 aa17.14■□□□□ 0.33
TRAPPC11-204ENST00000505676 GLYATL1P3A0A0U1RQE8 302 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 MEI4A8MW99 385 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 WASH3PC4AMC7 463 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 BTN3A1O00481 513 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 AZIN1O14977 448 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 SNX2O60749 519 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ECI2O75521 394 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF821O75541 412 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 TSPAN12O95859 305 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 RHOP08100 348 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 PRSS56P0CW18 603 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 MTTPP55157 894 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CARD16Q5EG05 197 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 PTRHD1Q6GMV3 140 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 GPSM1Q86YR5 675 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 BADQ92934 168 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 IRF7Q92985 503 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 LINGO1Q96FE5 620 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 SUV39H2Q9H5I1 410 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 NKX1-2Q9UD57 310 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF106Q9H2Y7 1883 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 LOC100653049A0A140TA62 436 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 EIF3FO00303 357 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 GIPC1O14908 333 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLASP2O75122 1294 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 KRT34O76011 436 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CHEK2O96017 543 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CTPS1P17812 591 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ACRV1P26436 265 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 WEE1P30291 646 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 HLA-FP30511 346 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 HNF1BP35680 557 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 VHLP40337 213 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLCN7P51798 805 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 STX1BP61266 288 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 CLCQ05315 142 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 TEAD2Q15562 447 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 TSNQ15631 228 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF77Q15935 545 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 MACC1Q6ZN28 852 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 SERPINA9Q86WD7 417 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 DTX3LQ8TDB6 740 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 BHMTQ93088 406 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 MOCOSQ96EN8 888 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 OSBPL1AQ9BXW6 950 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 ASB8Q9H765 288 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 SPHK2Q9NRA0 654 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 RAD18Q9NS91 495 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 TMEM45AQ9NWC5 275 aa17.13■□□□□ 0.33
TRAPPC11-204ENST00000505676 AGAP14A8MT82 685 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 HIDE1A8MVS5 230 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 TMEM233B4DJY2 109 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 NIPSNAP2O75323 286 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDK14O94921 469 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 ALPIP09923 528 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 HSPA8P11142 646 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 DGKAP23743 735 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 EEF1DP29692 281 aaKnown RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CCR2P41597 374 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 CDKN1CP49918 316 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 TTLL9Q3SXZ7 439 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 FUT11Q495W5 492 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 KIAA0907Q7Z7F0 614 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 AHI1Q8N157 1196 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 PPFIBP2Q8ND30 876 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 OR56A4Q8NGH8 313 aa17.12■□□□□ 0.33
TRAPPC11-204ENST00000505676 ZNF483Q8TF39 744 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms