RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GGNBP1Q5YKI7 109 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 PLA2G4FQ68DD2 849 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SUMO4Q6EEV6 95 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 TATDN1Q6P1N9 297 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CNSTQ6PJW8 725 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 MOXD1Q6UVY6 613 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 PPP1R21Q6ZMI0 780 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF813Q6ZN06 617 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM57BQ71RH2 274 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 INTS8Q75QN2 995 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CHSY1Q86X52 802 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SFTPA2Q8IWL1 248 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 DDIASQ8IXT1 998 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 RBFAQ8N0V3 343 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 LRRC57Q8N9N7 239 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 PNLDC1Q8NA58 520 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ATAD1Q8NBU5 361 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CORO2AQ92828 525 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ATP6V0A1Q93050 837 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZFYVE19Q96K21 471 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CABS1Q96KC9 395 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 EGLN2Q96KS0 407 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 UROC1Q96N76 676 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CAMK1GQ96NX5 476 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SMC6Q96SB8 1091 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 PI4K2AQ9BTU6 479 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM39BQ9GZU3 492 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CNOT10Q9H9A5 744 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CPNE5Q9HCH3 593 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 IL1RAPL2Q9NP60 686 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CYSLTR2Q9NS75 346 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ABCB8Q9NUT2 735 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 OR14J1Q9UGF5 321 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 DBNLQ9UJU6 430 aaKnown RBP3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 CDH7Q9ULB5 785 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 SALL3Q9BXA9 1300 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF541Q9H0D2 1346 aa3.89□□□□□ -1.79
TRAPPC13-208ENST00000505553 C2CD4BA6NLJ0 364 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 C19orf81C9J6K1 198 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 F8W810 466 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 VCYO14598 125 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPRY1O43609 319 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 UGDHO60701 494 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PRAMEF11O60813 436 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 KERAO60938 352 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC22A3O75751 556 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PNPP00491 289 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ICAM1P05362 532 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SNRNP70P08621 437 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CBSLP0DN79 551 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PDGFRAP16234 1089 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 GPD1P21695 349 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 MYF6P23409 242 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 NR2F2P24468 414 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 EEF1B2P24534 225 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CBSP35520 551 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 METAP2P50579 478 aaKnown RBP eCLIP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF75DP51815 510 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CDH13P55290 713 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 BPIFB3P59826 476 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 RBPJQ06330 500 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 STIM1Q13586 685 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 C2orf68Q2NKX9 166 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD20A4Q4UJ75 823 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD20A8PQ5CZ79 823 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD20A2Q5SQ80 823 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 C6orf136Q5SQH8 315 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 AKNAD1Q5T1N1 836 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD20A1Q5TYW2 823 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD20A3Q5VUR7 823 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM211Q6ICI0 200 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 C11orf57Q6ZUT1 292 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 RD3Q7Z3Z2 195 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SPATA21Q7Z572 469 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ADIPOR2Q86V24 386 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 HOOK3Q86VS8 718 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CEP57Q86XR8 500 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CAMK1DQ8IU85 385 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ERC1Q8IUD2 1116 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 TIGD4Q8IY51 512 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 AFAP1Q8N556 730 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 HORMAD2Q8N7B1 307 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 TRIML1Q8N9V2 468 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 AGBL3Q8NEM8 1001 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 KRT35Q92764 455 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 MAP4K1Q92918 833 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 RMDN2Q96LZ7 410 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 ZNF558Q96NG5 402 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 NEK1Q96PY6 1258 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 SH3GL2Q99962 352 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 EFHD1Q9BUP0 239 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 LHPPQ9H008 270 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 PIGMQ9H3S5 423 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 MID1IP1Q9NPA3 183 aa3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 DDX4Q9NQI0 724 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CHCHD3Q9NX63 227 aaKnown RBP3.88□□□□□ -1.79
TRAPPC13-208ENST00000505553 CISD1Q9NZ45 108 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms