RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 NEMP2A6NFY4 417 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ACRP10323 421 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 GM2AP17900 193 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 COQ5Q5HYK3 327 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 LYSMD3Q7Z3D4 306 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SPATA19Q7Z5L4 167 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 TMEM126BQ8IUX1 230 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 HS6ST3Q8IZP7 471 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 GIMAP7Q8NHV1 300 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CD200R1Q8TD46 325 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 HCAR2Q8TDS4 363 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 LRIG1Q96JA1 1093 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 LMLNQ96KR4 655 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PLEKHG4BQ96PX9 1271 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 RIC8BQ9NVN3 520 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 GLYATL1P3A0A0U1RQE8 302 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 WASH3PC4AMC7 463 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 BTN3A1O00481 513 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 RAD51BO15315 384 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ASLP04424 464 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CYP2A6P11509 494 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 HNRNPLP14866 589 aaKnown RBP eCLIP11.24□□□□□ -0.614e-7■■□□□ 13
NFKB1-205ENST00000505458 ACADSP16219 412 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ZNF30P17039 623 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CHRM3P20309 590 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 NNMTP40261 264 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PIK3CGP48736 1102 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 NUDT2P50583 147 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SLC25A3Q00325 362 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 OR4D1Q15615 310 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MYLK3Q32MK0 819 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ATXN7L2Q5T6C5 722 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PSAPL1Q6NUJ1 521 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MACC1Q6ZN28 852 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 TPGS1Q6ZTW0 290 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 APCDD1Q8J025 514 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MYO1HQ8N1T3 1032 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 POU5F2Q8N7G0 328 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PCYOX1LQ8NBM8 494 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 ZNF483Q8TF39 744 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 HERVK_113Q902F9 699 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CATSPER2Q96P56 530 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MCCC1Q96RQ3 725 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SLC46A2Q9BY10 475 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 LATS2Q9NRM7 1088 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 EVLQ9UI08 416 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 C1orf232A0A0U1RR37 186 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 DYTNA2CJ06 578 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 C5orf67F2Z3F1 127 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CLASP2O75122 1294 aaKnown RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PRAMEF1O95521 474 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MTHFD2P13995 350 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 KCNA5P22460 613 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PTDSS1P48651 473 aaKnown RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 HTRA3P83110 453 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CLCQ05315 142 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 NFATC2Q13469 925 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PTPRCAPQ14761 206 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 PFKFB4Q16877 469 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 GEN1Q17RS7 908 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CARD16Q5EG05 197 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 OGFOD2Q6N063 350 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 BRAT1Q6PJG6 821 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 FRA10AC1Q70Z53 315 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SHKBP1Q8TBC3 707 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 FUBP1Q96AE4 644 aaKnown RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SCRN2Q96FV2 425 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 NSMCE3Q96MG7 304 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 TDP1Q9NUW8 608 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 NFKBIL1Q9UBC1 381 aaPredicted RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 CRLS1Q9UJA2 301 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
NFKB1-205ENST00000505458 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.24□□□□□ -0.61
NFKB1-205ENST00000505458 QSOX1O00391 747 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 NVLO15381 856 aaKnown RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MAP3K7O43318 606 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ECI2O75521 394 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 UROSP10746 265 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 SRCP12931 536 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ITGB8P26012 769 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 PSMD8P48556 350 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 CTSL3PQ5NE16 218 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 RNF165Q6ZSG1 346 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 AHI1Q8N157 1196 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ROPN1LQ96C74 230 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ZNF382Q96SR6 550 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 OSBPL1AQ9BXW6 950 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 SUV39H2Q9H5I1 410 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MID1IP1Q9NPA3 183 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MCM8Q9UJA3 840 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MED16Q9Y2X0 877 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 UBXN8O00124 270 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 LIN7AO14910 233 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 KPNA5O15131 536 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms