RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 FUCA1P04066 466 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 SLC2A3P11169 496 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CCNB1P14635 433 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 BMP6P22004 513 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 PRCPP42785 496 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 STX17P56962 302 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 KIAA1024LP59773 190 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 PPP1CAP62136 330 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 SNRPD1P62314 119 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 PCDH1Q08174 1060 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ABHD18Q0P651 414 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ILF3Q12906 894 aaKnown RBP eCLIP3.61□□□□□ -1.83
USP46-205ENST00000504078 MTM1Q13496 603 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 DNASE1L3Q13609 305 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ACOX1Q15067 660 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 STILQ15468 1287 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 NFIL3Q16649 462 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 IFI16Q16666 785 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 C15orf59Q2T9L4 293 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 MYLK3Q32MK0 819 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TMEM52BQ4KMG9 183 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TAF3Q5VWG9 929 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 RAET1GQ6H3X3 334 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TCTN3Q6NUS6 607 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 FAM199XQ6PEV8 388 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 LVRNQ6Q4G3 990 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CEACAM20Q6UY09 585 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 RFLNAQ6ZTI6 216 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 C11orf57Q6ZUT1 292 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 SETD3Q86TU7 594 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 XYLT1Q86Y38 959 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CAMK1DQ8IU85 385 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 RASGRP3Q8IV61 690 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 PLD6Q8N2A8 252 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 PYROXD2Q8N2H3 581 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 GUF1Q8N442 669 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 WDTC1Q8N5D0 677 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CCDC185Q8N715 623 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 OR6C4Q8NGE1 309 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 OR4D9Q8NGE8 314 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 NCSTNQ92542 709 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CCDC47Q96A33 483 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 ARHGEF26Q96DR7 871 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 NUS1Q96E22 293 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 MOCOSQ96EN8 888 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CELF6Q96J87 481 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 HRASLS5Q96KN8 279 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 C5orf34Q96MH7 638 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TGM7Q96PF1 710 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 SMIM14Q96QK8 99 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 OR2M4Q96R27 311 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 MED15Q96RN5 788 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 HAPLN3Q96S86 360 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 PPP1R9BQ96SB3 815 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 NPY6RQ99463 290 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TSG101Q99816 390 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 CRACR2AQ9BSW2 395 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TRIM62Q9BVG3 475 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 NUDT9Q9BW91 350 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 GSDMCQ9BYG8 508 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 SLC29A3Q9BZD2 475 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 WDCPQ9H6R7 721 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 AKIRIN1Q9H9L7 192 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 SLAMF7Q9NQ25 335 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ACSS2Q9NR19 701 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 C1GALT1Q9NS00 363 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ASF1BQ9NVP2 202 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ARHGEF38Q9NXL2 777 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 SIDT1Q9NXL6 827 aaKnown RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 ARMCX3Q9UH62 379 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 CTNND2Q9UQB3 1225 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 KCNK6Q9Y257 313 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 ATP8A1Q9Y2Q0 1164 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 TMEM98Q9Y2Y6 226 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 COQ4Q9Y3A0 265 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 PCDHGB7Q9Y5F8 929 aa3.61□□□□□ -1.83
USP46-205ENST00000504078 MORC2Q9Y6X9 1032 aaPredicted RBP3.61□□□□□ -1.83
USP46-205ENST00000504078 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 DOCK4Q8N1I0 1966 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SPTBN1Q01082 2364 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 C2CD3Q4AC94 2353 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 IGLV3-10A0A075B6K4 115 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 ANKUB1A6NFN9 424 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 B4E171 279 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 EREGO14944 169 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 POLR1CO15160 346 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 MED7O43513 233 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 KIF1CO43896 1103 aaKnown RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 PSPNO60542 156 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 BUB1BO60566 1050 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ALOX12BO75342 701 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 CREG1O75629 220 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 RASSF9O75901 435 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 LRIG2O94898 1065 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 NDUFA10O95299 355 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 DDAH2O95865 285 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 F13A1P00488 732 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 SLC4A1P02730 911 aa3.6□□□□□ -1.83
USP46-205ENST00000504078 MYCLP1P12525 358 aaPredicted RBP3.6□□□□□ -1.83
USP46-205ENST00000504078 ACP5P13686 325 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms