RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DNAJC6O75061 913 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 PMPCBO75439 489 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 MT-CYBP00156 380 aaPredicted RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 SLC2A4P14672 509 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 PTPN3P26045 913 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 CYLC1P35663 651 aaPredicted RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 MAPK10P53779 464 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 GPLD1P80108 840 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 KCNC4Q03721 635 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
MED28-203ENST00000503945 NR1D2Q14995 579 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 LLGL1Q15334 1064 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 SLC14A2Q15849 920 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 NKAIN2Q5VXU1 208 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 SLC9B2Q86UD5 537 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 CCDC50Q8IVM0 306 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 EXD3Q8N9H8 876 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 TC2NQ8N9U0 490 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 SPATA22Q8NHS9 363 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 PATE1Q8WXA2 126 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 USP7Q93009 1102 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 CALR3Q96L12 384 aaKnown RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 TRIB3Q96RU7 358 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 VAT1Q99536 393 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 B3GNT4Q9C0J1 378 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 CARD9Q9H257 536 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 STN1Q9H668 368 aaKnown RBP11.84□□□□□ -0.51
MED28-203ENST00000503945 CLMPQ9H6B4 373 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 FAM153AQ9UHL3 310 aa11.84□□□□□ -0.51
MED28-203ENST00000503945 IGHV1OR21-1A0A087WYE8 117 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 IGHV5-10-1A0A0J9YXX1 117 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 OR5K4A6NMS3 321 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 FADS2P1A8MWK0 482 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 GPR89AB7ZAQ6 455 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 HGSO14964 777 aaPredicted RBP11.83□□□□□ -0.52
MED28-203ENST00000503945 SLC28A2O43868 658 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 SNX2O60749 519 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 ABCB7O75027 752 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 IPO7O95373 1038 aaKnown RBP11.83□□□□□ -0.52
MED28-203ENST00000503945 LCA5LO95447 670 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 NDST3O95803 873 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 EPOP01588 193 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 PIRTP0C851 137 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 GPR89BP0CG08 455 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 ITIH1P19827 911 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 CSTF2P33240 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
MED28-203ENST00000503945 FASLGP48023 281 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 LIMK2P53671 638 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TAZQ16635 292 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 LINC00303Q3SY05 128 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 PDPK2PQ6A1A2 396 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 DAAM2Q86T65 1068 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TMTC1Q8IUR5 882 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 KATNAL2Q8IYT4 538 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 SFRP1Q8N474 314 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TRAM1L1Q8N609 369 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 GPR26Q8NDV2 337 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 CCDC112Q8NEF3 446 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TADA1Q96BN2 335 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 EID2BQ96D98 161 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TAAR9Q96RI9 348 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 FERMT1Q9BQL6 677 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.83□□□□□ -0.52
MED28-203ENST00000503945 OR2AG1Q9H205 316 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 ATXN10Q9UBB4 475 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 TBC1D29Q9UFV1 150 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 ACSL6Q9UKU0 697 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 EPN1Q9Y6I3 576 aaPredicted RBP11.83□□□□□ -0.52
MED28-203ENST00000503945 OAS3Q9Y6K5 1087 aaKnown RBP11.83□□□□□ -0.52
MED28-203ENST00000503945 LRP4O75096 1905 aa11.83□□□□□ -0.52
MED28-203ENST00000503945 PRAMEF33A0A0G2JMD5 474 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HACD1B0YJ81 288 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 CDK14O94921 469 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ACP5P13686 325 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ZNF8P17098 575 aaPredicted RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 MPSTP25325 297 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 CD82P27701 267 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HMGCLP35914 325 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 HHEXQ03014 270 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 SRSF6Q13247 344 aaKnown RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 PRKD1Q15139 912 aaPredicted RBP11.82□□□□□ -0.52
MED28-203ENST00000503945 TGIF1Q15583 401 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ZDHHC20Q5W0Z9 365 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 ALS2CLQ60I27 953 aa11.82□□□□□ -0.52
MED28-203ENST00000503945 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms