RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SAPCD2Q86UD0 394 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 TCAIMQ8N3R3 496 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF655Q8N720 491 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 OR4K2Q8NGD2 314 aa16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 CLP1Q92989 425 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-202ENST00000503427 A0A1B0GVM2 712 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 TCAF2A6NFQ2 919 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ALOX5P09917 674 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 CDH4P55283 916 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ABRQ12979 859 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ZSWIM7Q19AV6 140 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 COQ7Q99807 217 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC25A51Q9H1U9 297 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 OR10H3O60404 316 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 NADKO95544 446 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 NDST2P52849 883 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 OLR1P78380 273 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 THAP5Q7Z6K1 395 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF781Q8N8C0 355 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 PRDM8Q9NQV8 689 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 DNAJA2O60884 412 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 GPIP06744 558 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 GRB14Q14449 540 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ERICH5Q6P6B1 374 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 DBF4BQ8NFT6 615 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 TEFMQ96QE5 360 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 TRMT13Q9NUP7 481 aaKnown RBP16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 CCDC182A6NF36 153 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 TAF4O00268 1085 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 CDH3P22223 829 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 LMO2P25791 158 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 GPD2P43304 727 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 GDF10P55107 478 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 COPZ1P61923 177 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 MPP1Q00013 466 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 CCL14Q16627 93 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 REP15Q6BDI9 236 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ROPN1LQ96C74 230 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF607Q96SK3 696 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 ADI1Q9BV57 179 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 CRISPLD1Q9H336 500 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 SMPD3Q9NY59 655 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 RAPGEFL1Q9UHV5 662 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 FBXW11Q9UKB1 542 aa16.07■□□□□ 0.16
HMGXB3-202ENST00000503427 MATN3O15232 486 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 FOXN2P32314 431 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 LCP2Q13094 533 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 C6orf52Q5T4I8 152 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 CDCA2Q69YH5 1023 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 CERS6Q6ZMG9 384 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 UBE2R2Q712K3 238 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 RASAL3Q86YV0 1011 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 CYP4X1Q8N118 509 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PCDH19Q8TAB3 1148 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PPM1MQ96MI6 270 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 RBM4BQ9BQ04 359 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 RBM4Q9BWF3 364 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 LRTM1Q9HBL6 345 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 UBAP1Q9NZ09 502 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 H7C0S8 307 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 NPHS1O60500 1241 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TNFRSF21O75509 655 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 CTSEP14091 401 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 IL12AP29459 219 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 FSTL1Q12841 308 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 VPS26BQ4G0F5 336 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 AP3S1Q92572 193 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TLE6Q9H808 572 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TXNRD2Q9NNW7 524 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PHRF1Q9P1Y6 1649 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC22A2O15244 555 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TRMUO75648 421 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 MTHFRP42898 656 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 DMPKQ09013 629 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 SOWAHAQ2M3V2 549 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 GALNT18Q6P9A2 607 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 RTL3Q8N8U3 475 aaKnown RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 C10orf82Q8WW14 230 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 FNDC11Q9BVV2 318 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 KCTD5Q9NXV2 234 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TAS2R1Q9NYW7 299 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF490Q9ULM2 529 aaPredicted RBP16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 TMCC2O75069 709 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 SPATA31D3P0C874 917 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PBX3P40426 434 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 APLP1P51693 650 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 GNA12Q03113 381 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 SPATA31D4Q6ZUB0 917 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PLD4Q96BZ4 506 aa16.06■□□□□ 0.16
HMGXB3-202ENST00000503427 PPCDCQ96CD2 204 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms