RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 KRBA1A5PL33 1030 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 GOLGA8OA6NCC3 632 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 MEI4A8MW99 385 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 ANKRD66B4E2M5 251 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 GOLGA8NF8WBI6 632 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 IPO13O94829 963 aaKnown RBP11.52□□□□□ -0.57
USP46-204ENST00000503060 LPOP22079 712 aaPredicted RBP11.52□□□□□ -0.57
USP46-204ENST00000503060 CPOXP36551 454 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 RXRGP48443 463 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 RHOAP61586 193 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 CDH18Q13634 790 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 NAA25Q14CX7 972 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 GAREM2Q75VX8 874 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 TMC8Q8IU68 726 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 TMEM199Q8N511 208 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 KDM1BQ8NB78 822 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 COG8Q96MW5 612 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 OSBPL1AQ9BXW6 950 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 LRRC3Q9BY71 257 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 NUF2Q9BZD4 464 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 ALG9Q9H6U8 611 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 POPDC3Q9HBV1 291 aa11.52□□□□□ -0.57
USP46-204ENST00000503060 DNMT3BQ9UBC3 853 aaKnown RBP11.52□□□□□ -0.57
USP46-204ENST00000503060 NEMP1O14524 444 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 DCXO43602 365 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 TM7SF2O76062 418 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 LMNAP02545 664 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 LRG1P02750 347 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 PRDX6P30041 224 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CDC25CP30307 473 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 RANBP1P43487 201 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 KLF10Q13118 480 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 KPNB1Q14974 876 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 LSM12Q3MHD2 195 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 OTOP2Q7RTS6 562 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 ISCA2Q86U28 154 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 SLC22A9Q8IVM8 553 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 EFHBQ8N7U6 833 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 ENDOVQ8N8Q3 282 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 MAB21L3Q8N8X9 362 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 DCAF4L2Q8NA75 395 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 TTC16Q8NEE8 873 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 PPP1R36Q96LQ0 422 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CCDC28BQ9BUN5 200 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 EBF2Q9HAK2 575 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 FCF1Q9Y324 198 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 F8W8V4 182 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 ANP32DO95626 131 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CKMP06732 381 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CD1DP15813 335 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 EPHA3P29320 983 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 KCNC1P48547 511 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 SLC7A9P82251 487 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 KHDC1Q4VXA5 237 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 LILRA6Q6PI73 481 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 SCUBE1Q8IWY4 988 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 WDR60Q8WVS4 1066 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 LPGAT1Q92604 370 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 PTERQ96BW5 349 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 TCF12Q99081 682 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 THTPAQ9BU02 230 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 POLR3BQ9NW08 1133 aaPredicted RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 GTSE1Q9NYZ3 720 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CFAP97Q9P2B7 532 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 CDYLQ9Y232 598 aa11.51□□□□□ -0.57
USP46-204ENST00000503060 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
USP46-204ENST00000503060 UBA6A0AVT1 1052 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 TMEM233B4DJY2 109 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 NDUFS3O75489 264 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 JUNP05412 331 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 LINC00271P0C7V0 271 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 TPBGLP0DKB5 382 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 HSPA8P11142 646 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 COX4I1P13073 169 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 HNRNPLP14866 589 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP46-204ENST00000503060 RPS2P15880 293 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 ZNF37AP17032 561 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 POU3F3P20264 500 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 PLK1P53350 603 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ACSBG2Q5FVE4 666 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 RALGPS1Q5JS13 557 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ATXN7L2Q5T6C5 722 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 HTR3DQ70Z44 454 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ULK2Q8IYT8 1036 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 FKBPLQ9UIM3 349 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ZNF510Q9Y2H8 683 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 PTPRSQ13332 1948 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 STX7O15400 261 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 FZD6O60353 706 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 KATNA1O75449 491 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 RHOBTB1O94844 696 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms