RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 FAM83DQ9H4H8 585 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNF768Q9H5H4 540 aaKnown RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 GPN2Q9H9Y4 310 aaPredicted RBP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDH9Q9HC56 1237 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MAGEE1Q9HCI5 957 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 TRIM39Q9HCM9 518 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 POT1Q9NUX5 634 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 CPNE7Q9UBL6 633 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 TBC1D29Q9UFV1 150 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 KCND3Q9UK17 655 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 MAST4O15021 2626 aa6.04□□□□□ -1.44
LSM3P4-201ENST00000502948 LOC101059948A0A1B0GTJ6 334 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TTC24A2A3L6 582 aaPredicted RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KLHL33A6NCF5 533 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 FADS2P1A8MWK0 482 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TMCO5BA8MYB1 307 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 C21orf140B9A014 251 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 GRID2O43424 1007 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 STK17BO94768 372 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 CLDN7O95471 211 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 EML2O95834 649 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 SERPING1P05155 500 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 FGF5P12034 268 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 GP1BBP13224 206 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TCF4P15884 667 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 CTPS1P17812 591 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 HNRNPH3P31942 346 aaKnown RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PBX1P40424 430 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 NOP2P46087 812 aaKnown RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 EPHB1P54762 984 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 CYP4F2P78329 520 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PPIDQ08752 370 aaKnown RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 DMPKQ09013 629 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KLRB1Q12918 225 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KRT81Q14533 505 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 IHHQ14623 411 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TCEA2Q15560 299 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ZDHHC20Q5W0Z9 365 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 E4F1Q66K89 784 aaPredicted RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 DENND2CQ68D51 928 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TMEM26Q6ZUK4 368 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TIPARPQ7Z3E1 657 aaKnown RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TMC3Q7Z5M5 1100 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 FAM129CQ86XR2 697 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KMT5CQ86Y97 462 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 HPS6Q86YV9 775 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TRAM1L1Q8N609 369 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 BRSK1Q8TDC3 778 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ZFPM2Q8WW38 1151 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KLHL6Q8WZ60 621 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 HSPH1Q92598 858 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 C9orf72Q96LT7 481 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PLEKHG4BQ96PX9 1271 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TRIB3Q96RU7 358 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 AGAP2Q99490 1192 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 C19orf43Q9BQ61 176 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 MLPHQ9BV36 600 aaPredicted RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 EPN3Q9H201 632 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ZFYVE1Q9HBF4 777 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 NT5MQ9NPB1 228 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 RBM22Q9NW64 420 aaKnown RBP eCLIP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TMEM9Q9P0T7 183 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ANKMY1Q9P2S6 941 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 UVRAGQ9P2Y5 699 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ZNHIT2Q9UHR6 403 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 CD84Q9UIB8 345 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 ANAPC7Q9UJX3 599 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 NENFQ9UMX5 172 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 TMEM98Q9Y2Y6 226 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PLEKHM1Q9Y4G2 1056 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDHB3Q9Y5E6 796 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 PCDHGB7Q9Y5F8 929 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 KCNMB2Q9Y691 235 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 DNMT3AQ9Y6K1 912 aaPredicted RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 OAS3Q9Y6K5 1087 aaKnown RBP6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
LSM3P4-201ENST00000502948 RELNP78509 3460 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 C1orf232A0A0U1RR37 186 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 GOLGA6CA6NDK9 693 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 GOLGA6BA6NDN3 693 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 KMOO15229 486 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 NKX2-8O15522 239 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 MFSD11O43934 449 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 MTA2O94776 668 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 UBXN7O94888 489 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 PROSCO94903 275 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 MAP3K6O95382 1288 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 ASMTLO95671 621 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 EPOP01588 193 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 ATP1A1P05023 1023 aaKnown RBP6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 HLA-DQB2P05538 268 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 MMP2P08253 660 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 MSL3P1P0C860 447 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 GOLGA6DP0CG33 693 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 TCN2P20062 427 aa6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 OAS2P29728 719 aaKnown RBP6.02□□□□□ -1.45
LSM3P4-201ENST00000502948 HMGCLP35914 325 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms