RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 PRAMEP78395 509 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 PDE1BQ01064 536 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 CREB5Q02930 508 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 CRYMQ14894 314 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 PCGF3Q3KNV8 242 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 DUSP28Q4G0W2 176 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 KRTCAP3Q53RY4 240 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 PAPD4Q6PIY7 484 aaKnown RBP4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 SPSB3Q6PJ21 355 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 RAD9BQ6WBX8 426 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 BBS10Q8TAM1 723 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 IGSF21Q96ID5 467 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 GFI1Q99684 422 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 SDF4Q9BRK5 362 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 MAGIXQ9H6Y5 334 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 SH2D4AQ9H788 454 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 ZNF556Q9HAH1 456 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 EBF2Q9HAK2 575 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 KLHL1Q9NR64 748 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 OGFRQ9NZT2 677 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 FBXW11Q9UKB1 542 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 NENFQ9UMX5 172 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 KLHL20Q9Y2M5 609 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 OR2W1Q9Y3N9 320 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 ZNF711Q9Y462 761 aa4.18□□□□□ -1.74
CDC42SE2-204ENST00000502639 IGHV4OR15-8A0A075B7B6 117 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 CDRT15L2A8MXV6 281 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SLC16A5O15375 505 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 OGG1O15527 345 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 KCNN4O15554 427 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 WISP2O76076 250 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 TPPPO94811 219 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SNRNP70P08621 437 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SELLP14151 372 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 GPR143P51810 404 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 ERVFC1-1P60608 527 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 PSMC6P62333 389 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SREBF2Q12772 1141 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 IKQ13123 557 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 MAD2L1Q13257 205 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 CCDC96Q2M329 555 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 ZSCAN23Q3MJ62 389 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 ACSM2BQ68CK6 577 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 FAM122CQ6P4D5 195 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 TMEM154Q6P9G4 183 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SZRD1Q7Z422 152 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 TMPRSS12Q86WS5 348 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 CEP97Q8IW35 865 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 LNX1Q8TBB1 728 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 FAM120BQ96EK7 910 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 PGAM5Q96HS1 289 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 TTC14Q96N46 770 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 SMC6Q96SB8 1091 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 EPB41L5Q9HCM4 733 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 HAUS2Q9NVX0 235 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 STK39Q9UEW8 545 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 FBXL2Q9UKC9 423 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 RALYQ9UKM9 306 aaKnown RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 ZNF215Q9UL58 517 aaPredicted RBP4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 GPR34Q9UPC5 381 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 AMDHD2Q9Y303 409 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 PTPRCP08575 1304 aa4.17□□□□□ -1.74
CDC42SE2-204ENST00000502639 PRAG1Q86YV5 1406 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 C5orf60A6NFR6 353 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 EIF4E1BA6NMX2 242 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 CLGNO14967 610 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 SMAD9O15198 467 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 HS6ST1O60243 411 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 RB1P06400 928 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 SRPRAP08240 638 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 HOXA13P31271 388 aaPredicted RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 ACSL1P33121 698 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 PSMB10P40306 273 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 MMP14P50281 582 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 SUOXP51687 545 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 RRP1P56182 461 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 MC1RQ01726 317 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 MYLK3Q32MK0 819 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 RAB41Q5JT25 222 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 RARS2Q5T160 578 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 ASB18Q6ZVZ8 466 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 TUBA1AQ71U36 451 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 Q75L30 129 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 FASTKD5Q7L8L6 764 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 TICAM1Q8IUC6 712 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 DCP1BQ8IZD4 617 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 RNF113BQ8IZP6 322 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 SLC38A9Q8NBW4 561 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 SLC38A5Q8WUX1 472 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 PIGTQ969N2 578 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 NSUN4Q96CB9 384 aaKnown RBP4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 LMLNQ96KR4 655 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 DUX5Q96PT3 197 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 TUBA1CQ9BQE3 449 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 KLHL9Q9P2J3 617 aa4.16□□□□□ -1.74
CDC42SE2-204ENST00000502639 UBA2Q9UBT2 640 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms