RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	MROH9	Q5TGP6	573 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	KCTD16	Q68DU8	428 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	KIAA1161	Q6NSJ0	714 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	NEK5	Q6P3R8	708 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ZNF549	Q6P9A3	640 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TAOK1	Q7L7X3	1001 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	MTERF4	Q7Z6M4	381 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	SERPINA9	Q86WD7	417 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	PELI3	Q8N2H9	469 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	NXPE1	Q8N323	547 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	GOLGA6L1	Q8N7Z2	621 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ASB12	Q8WXK4	309 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.06	□□□□□ -0.48	8e-11	■■■□□ 17.9
MATR3-231	ENST00000502394	CCDC97	Q96F63	343 aa	Predicted RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	BIRC8	Q96P09	236 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	VPS35	Q96QK1	796 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	IER2	Q9BTL4	223 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	ZSCAN5A	Q9BUG6	496 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	RIOK2	Q9BVS4	552 aa	Known RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	C1QTNF2	Q9BXJ5	285 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	P2RY12	Q9H244	342 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	CENPH	Q9H3R5	247 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	MKS1	Q9NXB0	559 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	KCTD5	Q9NXV2	234 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	BCCIP	Q9P287	314 aa	Known RBP eCLIP	12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	TXNDC16	Q9P2K2	825 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	CD84	Q9UIB8	345 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	MED16	Q9Y2X0	877 aa		12.06	□□□□□ -0.48
MATR3-231	ENST00000502394	NUMA1	Q14980	2115 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	BPTF	Q12830	3046 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	FAM95C	A0A1B0GW59	222 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	IGLON5	A6NGN9	336 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	NEMP1	O14524	444 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	ACADM	P11310	421 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	KRT15	P19012	456 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	CD9	P21926	228 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	TEAD1	P28347	426 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	OAS2	P29728	719 aa	Known RBP	12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	PTGER3	P43115	390 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	MAGEA9	P43362	315 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	B4GALNT1	Q00973	533 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	MAP7D1	Q3KQU3	841 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	CTSL3P	Q5NE16	218 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	LYPLAL1	Q5VWZ2	237 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	SEL1L3	Q68CR1	1132 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	OTUD6B	Q8N6M0	293 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	DDHD1	Q8NEL9	900 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	FLCN	Q8NFG4	579 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	TSTD1	Q8NFU3	115 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	ACMSD	Q8TDX5	336 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	HMGB4	Q8WW32	186 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	EDA	Q92838	391 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	ULK4	Q96C45	1275 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	AP2M1	Q96CW1	435 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	NUS1	Q96E22	293 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	HHIP	Q96QV1	700 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	AARSD1	Q9BTE6	412 aa	Known RBP	12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	SPATA16	Q9BXB7	569 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	SSU72	Q9NP77	194 aa	Known RBP	12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	ZDHHC3	Q9NYG2	299 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	CNOT6	Q9ULM6	557 aa	Known RBP	12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	NCKAP1	Q9Y2A7	1128 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	TECTA	O75443	2155 aa		12.05	□□□□□ -0.48
MATR3-231	ENST00000502394	TRIO	O75962	3097 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PRMT5	O14744	637 aa	Predicted RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TPP1	O14773	563 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TYROBP	O43914	113 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	LZTS3	O60299	673 aa	Predicted RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	OR1I1	O60431	355 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	NDUFS3	O75489	264 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TM7SF2	O76062	418 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PCDH8	O95206	1070 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PDGFB	P01127	241 aa	Predicted RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	MT-ND3	P03897	115 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	FDXR	P22570	491 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	PML	P29590	882 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	ACSL1	P33121	698 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SERPINB8	P50452	374 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TAS2R39	P59534	338 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	RPS21	P63220	83 aa	Known RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	POU4F1	Q01851	419 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	MTAP	Q13126	283 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	WSCD2	Q2TBF2	565 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	ZNF284	Q2VY69	593 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SETMAR	Q53H47	684 aa	Predicted RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	GPRC6A	Q5T6X5	926 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	HECTD2	Q5U5R9	776 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	FAM45BP	Q6NSW5	357 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	BLOC1S3	Q6QNY0	202 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TAS2R42	Q7RTR8	314 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	CMC1	Q7Z7K0	106 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TRIM69	Q86WT6	500 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	HORMAD1	Q86X24	394 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	SRRM1	Q8IYB3	904 aa	Known RBP	12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	RBFA	Q8N0V3	343 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	BANP	Q8N9N5	519 aa		12.04	□□□□□ -0.48
MATR3-231	ENST00000502394	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms