RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ZNF597Q96LX8 424 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZNF512Q96ME7 567 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 MUC13Q9H3R2 512 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 ACSS2Q9NR19 701 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
AFF3-215ENST00000498090 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 REV3LO60673 3130 aa12.38□□□□□ -0.43
AFF3-215ENST00000498090 ZNF638Q14966 1978 aaKnown RBP12.37□□□□□ -0.43
AFF3-215ENST00000498090 J3KR12 359 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 FBP2O00757 339 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 CD3EAPO15446 510 aaKnown RBP12.37□□□□□ -0.43
AFF3-215ENST00000498090 TLR5O60602 858 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 CD1DP15813 335 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 KCNA5P22460 613 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 PGGT1BP53609 377 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 ATP6V0D1P61421 351 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 DSC2Q02487 901 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 HYAL1Q12794 435 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 BNIP2Q12982 314 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 LSAMPQ13449 338 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 TAF12Q16514 161 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 ZNF789Q5FWF6 425 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 GPR158Q5T848 1215 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 KDELC2Q7Z4H8 507 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 PACRGLQ8N7B6 248 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 ANKRD49Q8WVL7 239 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 CDK5RAP1Q96SZ6 601 aaKnown RBP12.37□□□□□ -0.43
AFF3-215ENST00000498090 TCF12Q99081 682 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 ALG9Q9H6U8 611 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 ARMC1Q9NVT9 282 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 GID8Q9NWU2 228 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 PTTG2Q9NZH5 202 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
AFF3-215ENST00000498090 TRPM5Q9NZQ8 1165 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 PACSIN3Q9UKS6 424 aa12.37□□□□□ -0.43
AFF3-215ENST00000498090 C2orf78A6NCI8 922 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 AQP12BA6NM10 295 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 SYCE1LA8MT33 242 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 PFDN6O15212 129 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 LINC01565O15544 149 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 PRAMEF11O60813 436 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 MOSPD3O75425 235 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 RNASEH2AO75792 299 aaKnown RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 MATN4O95460 622 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 IGLV3-27P01718 113 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CD1EP15812 388 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 ZNF26P17031 533 aaPredicted RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 PSMC3P17980 439 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CES1P23141 567 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 GABRR2P28476 465 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CCR2P41597 374 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 EPHA5P54756 1037 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 NR1H2P55055 460 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CDKN2DP55273 166 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 NTHL1P78549 312 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 CYP4F8P98187 520 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 EFEMP1Q12805 493 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 TYSND1Q2T9J0 566 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 UGT3A2Q3SY77 523 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 UNC50Q53HI1 259 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 FBXL22Q6P050 247 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 PAOXQ6QHF9 649 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 DHFR2Q86XF0 187 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 ZNF354CQ86Y25 554 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 AQP12AQ8IXF9 295 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 MINDY1Q8N5J2 469 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 PCDH20Q8N6Y1 951 aaKnown RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 C12orf76Q8N812 135 aaPredicted RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 HMGCLL1Q8TB92 370 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 STAG3L4Q8TBR4 150 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 CDX2Q99626 313 aaPredicted RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 CCT7Q99832 543 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 SLC2A11Q9BYW1 496 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 NSUN3Q9H649 340 aaKnown RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 DNMT3BQ9UBC3 853 aaKnown RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
AFF3-215ENST00000498090 MYO7AQ13402 2215 aa12.36□□□□□ -0.43
AFF3-215ENST00000498090 TYW5A2RUC4 315 aaKnown RBP12.35□□□□□ -0.43
AFF3-215ENST00000498090 EME2A4GXA9 379 aaPredicted RBP12.35□□□□□ -0.43
AFF3-215ENST00000498090 AZIN1O14977 448 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 COCHO43405 550 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 PAPLNO95428 1278 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 SLC34A2O95436 690 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 SERPINF2P08697 491 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 POU2F2P09086 479 aa12.35□□□□□ -0.43
AFF3-215ENST00000498090 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
AFF3-215ENST00000498090 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms