RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 DIDO1Q9BTC0 2240 aaKnown RBP16.28■□□□□ 0.2
VIM-208ENST00000497849 KIR2DS5A0A0G2JLQ3 304 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 A0A0G2JNG1 304 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 KIR2DS3K7RE56 304 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 DFFAO00273 331 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 SNX2O60749 519 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 LRCH4O75427 683 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 ATP1A1P05023 1023 aaKnown RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 UNGP13051 313 aaPredicted RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 UCHL3P15374 230 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 TYRP1P17643 537 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 HTR7P34969 479 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 RENBPP51606 427 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 ZNF143P52747 638 aaPredicted RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 UBE2IP63279 158 aaKnown RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 KIR2DS5Q14953 304 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 HSP90AA4PQ58FG1 418 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 MIIPQ5JXC2 388 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 FAM199XQ6PEV8 388 aaPredicted RBP16.27■□□□□ 0.2
VIM-208ENST00000497849 NLRP8Q86W28 1048 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 TP53INP2Q8IXH6 220 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 SLC34A3Q8N130 599 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 PGBD5Q8N414 524 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 TTC13Q8NBP0 860 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 SEC14L1Q92503 715 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 PNPLA2Q96AD5 504 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 NDST4Q9H3R1 872 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 NOD2Q9HC29 1040 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 PCDHGB7Q9Y5F8 929 aa16.27■□□□□ 0.2
VIM-208ENST00000497849 TCRBV5S1A1TA0A578 114 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 DPM1O60762 260 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 ASMTLO95671 621 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 ACP5P13686 325 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 CTPS1P17812 591 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 VARSP26640 1264 aaKnown RBP16.26■□□□□ 0.19
VIM-208ENST00000497849 PTPN4P29074 926 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 PTSQ03393 145 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 CA9Q16790 459 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 LRRC66Q68CR7 880 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 SYVN1Q86TM6 617 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 PPP1R3BQ86XI6 285 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 FDCSPQ8NFU4 85 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 EXD1Q8NHP7 514 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 PIH1D2Q8WWB5 315 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 SNRNP40Q96DI7 357 aaKnown RBP16.26■□□□□ 0.19
VIM-208ENST00000497849 PLEKHG4BQ96PX9 1271 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 NUDCD1Q96RS6 583 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 GPR87Q9BY21 358 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 STK33Q9BYT3 514 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 VPS18Q9P253 973 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 CNOT6Q9ULM6 557 aaKnown RBP16.26■□□□□ 0.19
VIM-208ENST00000497849 PPIL1Q9Y3C6 166 aa16.26■□□□□ 0.19
VIM-208ENST00000497849 OR5K4A6NMS3 321 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 EEF2KO00418 725 aaKnown RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 UBXN7O94888 489 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 PGLSO95336 258 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 PEX11BO96011 259 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 SLC2A4P14672 509 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 ERCC2P18074 760 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 PTGIRP43119 386 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 RPL7AP62424 266 aaKnown RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 TPD52L1Q16890 204 aaPredicted RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 ZRANB3Q5FWF4 1079 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 TMCO4Q5TGY1 634 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 TMEM26Q6ZUK4 368 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 ZNF765Q7L2R6 523 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 PRSS42Q7Z5A4 293 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 KLHL6Q8WZ60 621 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 MARVELD3Q96A59 401 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 MOCOSQ96EN8 888 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 RANBP9Q96S59 729 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 RIOK2Q9BVS4 552 aaKnown RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 NUDT9Q9BW91 350 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 UCK1Q9HA47 277 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 ASF1BQ9NVP2 202 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 SCHIP1Q9P0W5 487 aaPredicted RBP16.25■□□□□ 0.19
VIM-208ENST00000497849 HIVEP1P15822 2718 aa16.25■□□□□ 0.19
VIM-208ENST00000497849 RASSF9O75901 435 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 GFPT2O94808 682 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 PYGLP06737 847 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 PDHA1P08559 390 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 PWWP2BQ6NUJ5 590 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 USP45Q70EL2 814 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 RHOT1Q8IXI2 618 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 AOPEPQ8N6M6 819 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
VIM-208ENST00000497849 ADAMTS17Q8TE56 1095 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 ZNF599Q96NL3 588 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 VPS16Q9H269 839 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 AP4E1Q9UPM8 1137 aa16.24■□□□□ 0.19
VIM-208ENST00000497849 HNRNPRO43390 633 aaKnown RBP16.23■□□□□ 0.19
VIM-208ENST00000497849 NELFEP18615 380 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms